RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 USP19O94966 1318 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 PRAMEF33A0A0G2JMD5 474 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 M0QYG6 137 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 MYO1FO00160 1098 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 FRS3O43559 492 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 PRAMEF10O60809 474 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 FZD7O75084 574 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 UNC5CO95185 931 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 FOSP01100 380 aaPredicted RBP5.46□□□□□ -1.54
CD44-215ENST00000525241 PIM1P11309 404 aaPredicted RBP5.46□□□□□ -1.54
CD44-215ENST00000525241 GNALP38405 381 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 ANXA11P50995 505 aaKnown RBP5.46□□□□□ -1.54
CD44-215ENST00000525241 VAV2P52735 878 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 FAM193AP78312 1265 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 MC2RQ01718 297 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 FAM160B1Q5W0V3 765 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 DARS2Q6PI48 645 aaKnown RBP5.46□□□□□ -1.54
CD44-215ENST00000525241 CLNKQ7Z7G1 428 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 GPR149Q86SP6 731 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 ASB10Q8WXI3 467 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 LRTOMTQ8WZ04 291 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 DPH1Q9BZG8 443 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 SERHL2Q9H4I8 314 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 NEU2Q9Y3R4 380 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 HS3ST3A1Q9Y663 406 aa5.46□□□□□ -1.54
CD44-215ENST00000525241 E7ENX8 843 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 GOLIM4O00461 696 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 TBX3O15119 743 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 VPS4BO75351 444 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 EGR2P11161 476 aaPredicted RBP5.45□□□□□ -1.54
CD44-215ENST00000525241 EN2P19622 333 aaPredicted RBP5.45□□□□□ -1.54
CD44-215ENST00000525241 SLC7A1P30825 629 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 MCM7P33993 719 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 ACVRL1P37023 503 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 ZEB1P37275 1124 aaPredicted RBP5.45□□□□□ -1.54
CD44-215ENST00000525241 TAP2Q03519 686 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 ABHD18Q0P651 414 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 SEMA5AQ13591 1074 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 DYRK1AQ13627 763 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 BOP1Q14137 746 aaKnown RBP5.45□□□□□ -1.54
CD44-215ENST00000525241 PTPAQ15257 358 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 SP5Q6BEB4 398 aaPredicted RBP5.45□□□□□ -1.54
CD44-215ENST00000525241 TAF2Q6P1X5 1199 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 SLC30A10Q6XR72 485 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 Q6ZPA2 131 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 ZNF627Q7L945 461 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 FAM46DQ8NEK8 389 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 LARP4BQ92615 738 aaKnown RBP5.45□□□□□ -1.54
CD44-215ENST00000525241 TTC17Q96AE7 1141 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 WDR11Q9BZH6 1224 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 SMOC2Q9H3U7 446 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 TPCN1Q9ULQ1 816 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 PLEKHM1Q9Y4G2 1056 aa5.45□□□□□ -1.54
CD44-215ENST00000525241 PIPSLA2A3N6 862 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 THP07101 528 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 GRPP07492 148 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 ADH4P08319 380 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 MYF5P13349 255 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 PEX2P28328 305 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 RPS7P62081 194 aaKnown RBP5.44□□□□□ -1.54
CD44-215ENST00000525241 FPGSQ05932 587 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 HLTFQ14527 1009 aaKnown RBP eCLIP5.44□□□□□ -1.54
CD44-215ENST00000525241 POLD3Q15054 466 aaPredicted RBP5.44□□□□□ -1.54
CD44-215ENST00000525241 CD300EQ496F6 205 aaPredicted RBP5.44□□□□□ -1.54
CD44-215ENST00000525241 CCDC181Q5TID7 509 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 VRK3Q8IV63 474 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 COLGALT2Q8IYK4 626 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 ULK2Q8IYT8 1036 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 ADGRG5Q8IZF4 528 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 PSD4Q8NDX1 1056 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 TMEM125Q96AQ2 219 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 APIPQ96GX9 242 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 SPATA5L1Q9BVQ7 753 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 SARGQ9BW04 601 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 SMURF2Q9HAU4 748 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 STK32BQ9NY57 414 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 HESX1Q9UBX0 185 aa5.44□□□□□ -1.54
CD44-215ENST00000525241 BTN3A1O00481 513 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 TOR1BO14657 336 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 DCLK1O15075 740 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 CHRM3P20309 590 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 GATA3P23771 443 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 SLC11A2P49281 568 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 SUMO3P55854 103 aaPredicted RBP5.43□□□□□ -1.54
CD44-215ENST00000525241 UCP3P55916 312 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 TBX4P57082 545 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 HLXQ14774 488 aaPredicted RBP5.43□□□□□ -1.54
CD44-215ENST00000525241 ABHD17BQ5VST6 288 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 PPP4R4Q6NUP7 873 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 ZNF783Q6ZMS7 281 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 OR6B3Q8NGW1 331 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 FBXO41Q8TF61 875 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 MAML1Q92585 1016 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 CCDC136Q96JN2 1154 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 HEPHQ9BQS7 1158 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 INTS13Q9NVM9 706 aa5.43□□□□□ -1.54
CD44-215ENST00000525241 CPNE7Q9UBL6 633 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms