RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PDCL3Q9H2J4 239 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 PABPC3Q9H361 631 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 NDST4Q9H3R1 872 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 ABHD16BQ9H3Z7 469 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 VPS37BQ9H9H4 285 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 STK32BQ9NY57 414 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 PRR13Q9NZ81 148 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 C5AR2Q9P296 337 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 PI4KBQ9UBF8 816 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 AFF4Q9UHB7 1163 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 CCL27Q9Y4X3 112 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 TRIM17Q9Y577 477 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 PCDHGC5Q9Y5F6 944 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 SQORQ9Y6N5 450 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 AP1M2Q9Y6Q5 423 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 COL17A1Q9UMD9 1497 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 A0A0U1RQK1 487 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 ZNF320A2RRD8 509 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 CCDC151A5D8V7 595 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 H3BUI4 141 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 K7EPI3 171 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 AP3B1O00203 1094 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 TAF4O00268 1085 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 CACNB4O00305 520 aaPredicted RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 MSTNO14793 375 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 ASNA1O43681 348 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 NDST3O95803 873 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 IGHA1P01876 353 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 OPN1MWP04001 364 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 PROCP04070 461 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 PRKCBP05771 671 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 LPLP06858 475 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 SNRPA1P09661 255 aaKnown RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 OPN1MW2P0DN77 364 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 OPN1MW3P0DN78 364 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 C6P13671 934 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 EN2P19622 333 aaPredicted RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 CCNCP24863 283 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 TM4SF1P30408 202 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 STIP1P31948 543 aaKnown RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 RFC1P35251 1148 aaPredicted RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 GRK3P35626 688 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 EIF2DP41214 584 aaKnown RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 MTHFRP42898 656 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 INHBEP58166 350 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 C21orf58P58505 322 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 STARD6P59095 220 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 HTD2P86397 168 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 MECOMQ03112 1051 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 YWHAHQ04917 246 aaPredicted RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 SPEM2Q0P670 501 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 GALNT2Q10471 571 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 NOGQ13253 232 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 NMIQ13287 307 aaPredicted RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 SGCGQ13326 291 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 NKG7Q16617 165 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 ALG11Q2TAA5 492 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 KBTBD12Q3ZCT8 623 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 BMP2KLQ5H9B9 411 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 C3orf38Q5JPI3 329 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 PPM1JQ5JR12 505 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 ATG16L1Q676U5 607 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 FSTL4Q6MZW2 842 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 MFSD5Q6N075 450 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 MTFR2Q6P444 385 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 KLHDC10Q6PID8 442 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 LINC00114Q6XXX2 140 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 ARHGEF18Q6ZSZ5 1173 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 H1FNTQ75WM6 255 aaPredicted RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 KIAA2013Q8IYS2 634 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 AOPEPQ8N6M6 819 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 KLHL23Q8NBE8 558 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 GLIS1Q8NBF1 620 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 RCBTB1Q8NDN9 531 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 PPP1R13LQ8WUF5 828 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 SEPT1Q8WYJ6 367 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 SHC3Q92529 594 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 BHMTQ93088 406 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 ZNF653Q96CK0 615 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 CDCA5Q96FF9 252 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 CLMNQ96JQ2 1002 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 FAM167AQ96KS9 214 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 SNX22Q96L94 193 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 C1orf74Q96LT6 269 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 P2RX7Q99572 595 aaKnown RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 CITED2Q99967 270 aaPredicted RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 REEP2Q9BRK0 252 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 ZCWPW1Q9H0M4 648 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 WNT8AQ9H1J5 351 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 SEMA4AQ9H3S1 761 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 SEMA6BQ9H3T3 888 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 NCOR1P1Q9H4R4 102 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 THAP9Q9H5L6 903 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 IGFLR1Q9H665 355 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 SH2B1Q9NRF2 756 aaPredicted RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 COQ3Q9NZJ6 369 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 CACNG4Q9UBN1 327 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 ZMAT5Q9UDW3 170 aaKnown RBP4.85□□□□□ -1.63
CD44-213ENST00000525209 DPP7Q9UHL4 492 aa4.85□□□□□ -1.63
CD44-213ENST00000525209 CFAP45Q9UL16 551 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms