RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 MID2Q9UJV3 735 aa17.92■□□□□ 0.46
BEST1-203ENST00000524877 SLC45A1Q9Y2W3 748 aa17.92■□□□□ 0.46
BEST1-203ENST00000524877 ZMYM2Q9UBW7 1377 aa17.92■□□□□ 0.46
BEST1-203ENST00000524877 ACKR2O00590 384 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 RNASEH1O60930 286 aaKnown RBP17.91■□□□□ 0.46
BEST1-203ENST00000524877 GPD1P21695 349 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 ITGA7Q13683 1181 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 BRD3Q15059 726 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 ELOA2Q8IYF1 753 aaPredicted RBP17.91■□□□□ 0.46
BEST1-203ENST00000524877 RFFLQ8WZ73 363 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 KIF2CQ99661 725 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 SEZ6LQ9BYH1 1024 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.91■□□□□ 0.46
BEST1-203ENST00000524877 ZNF177Q13360 481 aaPredicted RBP17.91■□□□□ 0.46
BEST1-203ENST00000524877 NBPF20Q3BBV1 942 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 VSIG1Q86XK7 387 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 NT5DC4Q86YG4 428 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 STK38LQ9Y2H1 464 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 E5RI56 91 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 TLR2O60603 784 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 ARL4CP56559 192 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 PSMC6P62333 389 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 GNGT1P63211 74 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 DUSP28Q4G0W2 176 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 UHMK1Q8TAS1 419 aaKnown RBP17.91■□□□□ 0.46
BEST1-203ENST00000524877 CYP2W1Q8TAV3 490 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 CSGALNACT1Q8TDX6 532 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 PPP1R2P1Q96PQ5 205 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 PALMDQ9NP74 551 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 SNCAIPQ9Y6H5 919 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 SPATA31C2B4DYI2 1134 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 F5H5T6 163 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 CSDE1O75534 798 aaKnown RBP17.91■□□□□ 0.46
BEST1-203ENST00000524877 FBXO21O94952 628 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 CXCL8P10145 99 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 SOX10P56693 466 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 TMC2Q8TDI7 906 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 PYROXD1Q8WU10 500 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 CRHR2Q13324 411 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 BCAS4Q8TDM0 211 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 SCG3Q8WXD2 468 aaKnown RBP17.91■□□□□ 0.46
BEST1-203ENST00000524877 CYP3A43Q9HB55 503 aa17.91■□□□□ 0.46
BEST1-203ENST00000524877 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 TERF2Q15554 542 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 MDH1BQ5I0G3 518 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 SRRM1Q8IYB3 904 aaKnown RBP17.9■□□□□ 0.46
BEST1-203ENST00000524877 APBB2Q92870 758 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 MCEEQ96PE7 176 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 SCOCQ9UIL1 159 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 LRP6O75581 1613 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 NTRK3Q16288 839 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 CCDC149Q6ZUS6 474 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 LCA5Q86VQ0 697 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 AP1M1Q9BXS5 423 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 SLITRK3O94933 977 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 RARRES1P49788 294 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 TAF1BQ53T94 588 aaPredicted RBP17.9■□□□□ 0.46
BEST1-203ENST00000524877 TRAPPC11Q7Z392 1133 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 NUF2Q9BZD4 464 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 TLR8Q9NR97 1041 aaKnown RBP17.9■□□□□ 0.46
BEST1-203ENST00000524877 UVRAGQ9P2Y5 699 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 AP3B1O00203 1094 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 UCHL3P15374 230 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 MX2P20592 715 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 GKAP1Q5VSY0 366 aaPredicted RBP17.9■□□□□ 0.46
BEST1-203ENST00000524877 SPOPLQ6IQ16 392 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 ZNF720Q7Z2F6 126 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 CXorf38Q8TB03 319 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 YIPF3Q9GZM5 350 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 DDX43Q9NXZ2 648 aaKnown RBP17.9■□□□□ 0.46
BEST1-203ENST00000524877 CAPN11Q9UMQ6 739 aa17.9■□□□□ 0.46
BEST1-203ENST00000524877 PODXLO00592 558 aa17.89■□□□□ 0.46
BEST1-203ENST00000524877 PRKCZQ05513 592 aa17.89■□□□□ 0.46
BEST1-203ENST00000524877 CYP24A1Q07973 514 aa17.89■□□□□ 0.46
BEST1-203ENST00000524877 ACOT1Q86TX2 421 aa17.89■□□□□ 0.46
BEST1-203ENST00000524877 RCOR2Q8IZ40 523 aa17.89■□□□□ 0.46
BEST1-203ENST00000524877 USP38Q8NB14 1042 aa17.89■□□□□ 0.46
BEST1-203ENST00000524877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.89■□□□□ 0.46
BEST1-203ENST00000524877 TTC19Q6DKK2 380 aaPredicted RBP17.89■□□□□ 0.45
BEST1-203ENST00000524877 LBX2Q6XYB7 198 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 TTC36A6NLP5 189 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 MAP3K13O43283 966 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 TAC1P20366 129 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 BCAT1P54687 386 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 ZPBP2Q6X784 338 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.89■□□□□ 0.45
BEST1-203ENST00000524877 USP49Q70CQ1 688 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 CBWD2Q8IUF1 395 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 DHX40Q8IX18 779 aaKnown RBP17.89■□□□□ 0.45
BEST1-203ENST00000524877 ABRAQ8N0Z2 381 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 CHCHD3Q9NX63 227 aaKnown RBP17.89■□□□□ 0.45
BEST1-203ENST00000524877 KCPQ6ZWJ8 1503 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 FGBP02675 491 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 MMP3P08254 477 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 ACO1P21399 889 aaKnown RBP17.89■□□□□ 0.45
BEST1-203ENST00000524877 PPM1AP35813 382 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 C2orf54Q08AI8 447 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 TRIM42Q8IWZ5 723 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 HINFPQ9BQA5 517 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 COL1A2P08123 1366 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms