RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 PTPRJQ12913 1337 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 OBSL1O75147 1896 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 KRBA1A5PL33 1030 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 NRG2O14511 850 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 ZNF197O14709 1029 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 CLIC2O15247 247 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 MOSPD3O75425 235 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 MICAL2O94851 1124 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 CCR2P41597 374 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 CLCN5P51795 746 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 EPHA5P54756 1037 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 SNRPFP62306 86 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 NHLH1Q02575 133 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 SURF1Q15526 300 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 LMBRD2Q68DH5 695 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 IQCEQ6IPM2 695 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 PDZD4Q76G19 769 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 TTC9BQ8N6N2 239 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 LRRC52Q8N7C0 313 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 ATAD1Q8NBU5 361 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 LEMD2Q8NC56 503 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 FLCNQ8NFG4 579 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 GPR152Q8TDT2 470 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 MTMR12Q9C0I1 747 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 DNAJC25Q9H1X3 360 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 KIAA1586Q9HCI6 787 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 INTS13Q9NVM9 706 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 GDE1Q9NZC3 331 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 CA14Q9ULX7 337 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 SLC27A5Q9Y2P5 690 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 COL4A2P08572 1712 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 TMEM191BP0C7N4 346 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 MYL4P12829 197 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 NUBP1P53384 320 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 PTPN5P54829 565 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 RBP5P82980 135 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 TCF15Q12870 199 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 SLC39A12Q504Y0 691 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 CYP4A22Q5TCH4 519 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 CSGALNACT2Q8N6G5 542 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 OR5B17Q8NGF7 314 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 ANKRD36BP1Q96IX9 119 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 LRRC3Q9BY71 257 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 ASAH2Q9NR71 780 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 HSFX1Q9UBD0 423 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 ATP6V1DQ9Y5K8 247 aa12.03□□□□□ -0.48
TRAPPC4-204ENST00000524797 COL4A3Q01955 1670 aa12.02□□□□□ -0.48
TRAPPC4-204ENST00000524797 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 ECI2O75521 394 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 TNNC2P02585 160 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 KRT19P08727 400 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 CYP2J2P51589 502 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 EPHB3P54753 998 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 GPC5P78333 572 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 BECN1Q14457 450 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 LRRTM3Q86VH5 581 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 TMC8Q8IU68 726 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 C12orf56Q8IXR9 622 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 PDCL2Q8N4E4 241 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 SHKBP1Q8TBC3 707 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 PLA2G2FQ9BZM2 168 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 EXOC1Q9NV70 894 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 CGNQ9P2M7 1197 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 L1RE1Q9UN81 338 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 PTPRDP23468 1912 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 TICRRQ7Z2Z1 1910 aa12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 ZNF638Q14966 1978 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-204ENST00000524797 SOAT2O75908 522 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 GJA1P17302 382 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 AOC1P19801 751 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 FCARP24071 287 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 SYKP43405 635 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 ALDH1A3P47895 512 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 NDUFA8P51970 172 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 CYP24A1Q07973 514 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 PSMD2Q13200 908 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 PSMD6Q15008 389 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 SNRNP35Q16560 246 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 TANGO2Q6ICL3 276 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 OSTM1Q86WC4 334 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 WDR49Q8IV35 697 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 DCP1BQ8IZD4 617 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 FSIP1Q8NA03 581 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 XXYLT1Q8NBI6 393 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 RDH13Q8NBN7 331 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 C2orf15Q8WU43 125 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 ELSPBP1Q96BH3 223 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 CGRRF1Q99675 332 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 SCAND2PQ9GZW5 306 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 TBC1D17Q9HA65 648 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 ARHGEF3Q9NR81 526 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 GDAP2Q9NXN4 497 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 ASB3Q9Y575 518 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 A0A1W2PQ27 194 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 A0A1W2PQ64 194 aa12.01□□□□□ -0.49
TRAPPC4-204ENST00000524797 A0A1W2PQD8 194 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms