RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 HELQQ8TDG4 1101 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 SHC3Q92529 594 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 RABGGTAQ92696 567 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 THAP11Q96EK4 314 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 BICD1Q96G01 975 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 CPB2Q96IY4 423 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 CRACR2AQ9BSW2 395 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 TMEM117Q9H0C3 514 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 ALG13Q9NP73 1137 aaKnown RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 NLRC4Q9NPP4 1024 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 PRMT7Q9NVM4 692 aaPredicted RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 NAGPAQ9UK23 515 aa7.59□□□□□ -1.19
VPS11-201ENST00000524454 AGO2Q9UKV8 859 aaKnown RBP7.59□□□□□ -1.19
VPS11-201ENST00000524454 NCANO14594 1321 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 LRRIQ4A6NIV6 560 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 LRRIQ3A6PVS8 624 aaPredicted RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 ANKRD63C9JTQ0 380 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 H3BNC9 293 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 INO80B-WBP1J3KQ70 363 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 ACKR2O00590 384 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 B4GALT5O43286 388 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 ADRB2P07550 413 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 TRIM49P0CI25 452 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 TRIM49CP0CI26 452 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 GZMAP12544 262 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 PROZP22891 400 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 TBXAS1P24557 533 aaPredicted RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 MCM3P25205 808 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 DNAJB1P25685 340 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 BMPR1AP36894 532 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 PHKA2P46019 1235 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 BPIFB4P59827 614 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 FAM189BP81408 668 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 PPP3CAQ08209 521 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 NCBP1Q09161 790 aaKnown RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 ZACNQ401N2 412 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 CLLU1OSQ5K130 101 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 TWF2Q6IBS0 349 aaKnown RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 RSRC2Q7L4I2 434 aaKnown RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 APBB1IPQ7Z5R6 666 aaPredicted RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 NT5DC4Q86YG4 428 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 CBWD2Q8IUF1 395 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 WDR49Q8IV35 697 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 BRSK2Q8IWQ3 736 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 SCUBE3Q8IX30 993 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 FAM71AQ8IYT1 594 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 CMTR2Q8IYT2 770 aaKnown RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 SYCE1Q8N0S2 351 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 SLC35F6Q8N357 371 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 KLHL23Q8NBE8 558 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 SLC30A5Q8TAD4 765 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 UBXN4Q92575 508 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 GOLGA1Q92805 767 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 NT5C1BQ96P26 610 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 TSPAN18Q96SJ8 248 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 CGRRF1Q99675 332 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 KIFC3Q9BVG8 833 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 EIF2AQ9BY44 585 aaKnown RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 INO80BQ9C086 356 aaPredicted RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 GPR88Q9GZN0 384 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 LACRTQ9GZZ8 138 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 FZD8Q9H461 694 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 C1orf112Q9NSG2 853 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 ARGLU1Q9NWB6 273 aaPredicted RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 RAB20Q9NX57 234 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 TMEM161AQ9NX61 479 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 DNAJC12Q9UKB3 198 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 GUCA1BQ9UMX6 200 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 INPP5FQ9Y2H2 1132 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 SAR1BQ9Y6B6 198 aa7.58□□□□□ -1.2
VPS11-201ENST00000524454 TDRD15B5MCY1 1934 aaKnown RBP7.58□□□□□ -1.2
VPS11-201ENST00000524454 CNTNAP2Q9UHC6 1331 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 TRANK1O15050 2925 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 A0A087X0T9 212 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 NT5C1B-RDH14C9J2C7 533 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 OGTO15294 1046 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 CLDN3O15551 220 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 FAM189A1O60320 539 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 TSPAN1O60635 241 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 ERLIN2O94905 339 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 IL18RAPO95256 599 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 EDN1P05305 212 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 ITGB1P05556 798 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 PLEKP08567 350 aaPredicted RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 TMEM253P0C7T8 217 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 FAM228BP0C875 321 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 NDUFV2P19404 249 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 HOXA11P31270 313 aaPredicted RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 IRS1P35568 1242 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 KCNQ1P51787 676 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 PTENP60484 403 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 MBTD1Q05BQ5 628 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 DRAP1Q14919 205 aaPredicted RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 UBXN11Q5T124 520 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 PHLDB3Q6NSJ2 640 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 ALKBH5Q6P6C2 394 aaKnown RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 RNF19BQ6ZMZ0 732 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 ZNF571Q7Z3V5 609 aaPredicted RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 ZNF598Q86UK7 904 aaKnown RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 RHOT2Q8IXI1 618 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms