RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	EFCAB13	Q8IY85	973 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	MREG	Q8N565	214 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	SOCS4	Q8WXH5	440 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	FAXDC2	Q96IV6	333 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	RBM41	Q96IZ5	413 aa	Known RBP	11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	PKNOX2	Q96KN3	472 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	CCDC114	Q96M63	670 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	FMO2	Q99518	471 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	TRIM51	Q9BSJ1	452 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	KATNAL1	Q9BW62	490 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	TRIM31	Q9BZY9	425 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	MIS12	Q9H081	205 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	FAM204A	Q9H8W3	233 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	ZCCHC17	Q9NP64	241 aa	Known RBP	11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	HOMER3	Q9NSC5	361 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	ITGA11	Q9UKX5	1188 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	CNTN6	Q9UQ52	1028 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	GINS2	Q9Y248	185 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	TRIOBP	Q9H2D6	2365 aa		11.43	□□□□□ -0.58
SPIDR-222	ENST00000524006	MROH7	Q68CQ1	1323 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	SCN1A	P35498	2009 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	LACTBL1	A8MY62	500 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	ABLIM1	O14639	778 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	DAPK3	O43293	454 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	XPOT	O43592	962 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	ECM2	O94769	699 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	NPTXR	O95502	500 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	ECEL1	O95672	775 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	KRT1	P04264	644 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	MYL3	P08590	195 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	PAEP	P09466	180 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	ATF7	P17544	494 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	FNTA	P49354	379 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	ZNF132	P52740	706 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	RBP5	P82980	135 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	IFFO1	Q0D2I5	559 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	IRF5	Q13568	498 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	ZNF394	Q53GI3	561 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	JADE1	Q6IE81	842 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	NOTUM	Q6P988	496 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	CCDC137	Q6PK04	289 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	PHLDB2	Q86SQ0	1253 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	JAML	Q86YT9	394 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	C1orf131	Q8NDD1	294 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	FEZF2	Q8TBJ5	459 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	ZNF606	Q8WXB4	792 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	ZBTB10	Q96DT7	871 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	KIF12	Q96FN5	646 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	C16orf70	Q9BSU1	422 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	FAM129A	Q9BZQ8	928 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	CYP3A43	Q9HB55	503 aa		11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006	TDRD15	B5MCY1	1934 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-222	ENST00000524006		A0A0C4DFX4	3053 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	ERICH4	A6NGS2	130 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006		M0QZ92	97 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	DYNC1LI2	O43237	492 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	TSPAN1	O60635	241 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	WEE2	P0C1S8	567 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	SMIM10L2A	P0DMW4	78 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	SMIM10L2B	P0DMW5	78 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	GNAT1	P11488	350 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	CYP2C9	P11712	490 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	ARF4	P18085	180 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	HSPA9	P38646	679 aa	Known RBP	11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	GRM5	P41594	1212 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	ASPA	P45381	313 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	SNX16	P57768	344 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	MFSD10	Q14728	455 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	WDR72	Q3MJ13	1102 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	TMEM63B	Q5T3F8	832 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	LRIG3	Q6UXM1	1119 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	CEP120	Q8N960	986 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	BEST2	Q8NFU1	509 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	SH3TC2	Q8TF17	1288 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	CD101	Q93033	1021 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	ZBTB9	Q96C00	473 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	HPDL	Q96IR7	371 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	APBA2	Q99767	749 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	ERP44	Q9BS26	406 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	TMEM106C	Q9BVX2	250 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	CELF4	Q9BZC1	486 aa	Known RBP	11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	KATNBL1	Q9H079	304 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	CENPH	Q9H3R5	247 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	MINDY3	Q9H8M7	445 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	IFT122	Q9HBG6	1241 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	PTPRH	Q9HD43	1115 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	WDR35	Q9P2L0	1181 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	ASIC3	Q9UHC3	531 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	PCDHGC3	Q9UN70	934 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	POLI	Q9UNA4	740 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	C2CD2	Q9Y426	696 aa		11.41	□□□□□ -0.58
SPIDR-222	ENST00000524006	NRCAM	Q92823	1304 aa		11.4	□□□□□ -0.58
SPIDR-222	ENST00000524006	GOLGA8S	H3BPF8	625 aa		11.4	□□□□□ -0.58
SPIDR-222	ENST00000524006		M0QYV0	167 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms