RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 CEP72Q9P209 647 aa20.61■□□□□ 0.89
FBXO28-205ENST00000523990 L1RE1Q9UN81 338 aa20.61■□□□□ 0.89
FBXO28-205ENST00000523990 PTPRDP23468 1912 aa20.61■□□□□ 0.89
FBXO28-205ENST00000523990 DLATP10515 647 aaKnown RBP20.6■□□□□ 0.89
FBXO28-205ENST00000523990 BFSP1Q12934 665 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 PRSS36Q5K4E3 855 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 CENPPQ6IPU0 288 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 ELMOD1Q8N336 334 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 PDCL2Q8N4E4 241 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 TMEM174Q8WUU8 243 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 MFSD14AQ96MC6 490 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 CGRRF1Q99675 332 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 CORO1BQ9BR76 489 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 MRPS23Q9Y3D9 190 aaKnown RBP20.6■□□□□ 0.89
FBXO28-205ENST00000523990 NUMBLQ9Y6R0 609 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 MUC6Q6W4X9 2439 aa20.6■□□□□ 0.89
FBXO28-205ENST00000523990 NUP210Q8TEM1 1887 aaPredicted RBP20.6■□□□□ 0.89
FBXO28-205ENST00000523990 DMDP11532 3685 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 NARSO43776 548 aaKnown RBP20.59■□□□□ 0.89
FBXO28-205ENST00000523990 EXOC3O60645 756 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 SLC39A12Q504Y0 691 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 FMR1NBQ8N0W7 255 aaPredicted RBP20.59■□□□□ 0.89
FBXO28-205ENST00000523990 THEM5Q8N1Q8 247 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 TTC9BQ8N6N2 239 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 ATAD1Q8NBU5 361 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 ING5Q8WYH8 240 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 FGF14Q92915 247 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 CCDC47Q96A33 483 aaKnown RBP20.59■□□□□ 0.89
FBXO28-205ENST00000523990 FNBP1Q96RU3 617 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 HSFX1Q9UBD0 423 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 SNX9Q9Y5X1 595 aa20.59■□□□□ 0.89
FBXO28-205ENST00000523990 PDXKO00764 312 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 HUS1O60921 280 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 PRPF40AO75400 957 aaKnown RBP20.58■□□□□ 0.88
FBXO28-205ENST00000523990 PDGFBP01127 241 aaPredicted RBP20.58■□□□□ 0.88
FBXO28-205ENST00000523990 CEBPBP17676 345 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 TNNI1P19237 187 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 CCR2P41597 374 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 EPHA5P54756 1037 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 PLD1Q13393 1074 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 KCNB1Q14721 858 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 TRAPPC11Q7Z392 1133 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 SLC9A9Q8IVB4 645 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 TMEM86AQ8N2M4 240 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 FBXL6Q8N531 539 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 CCDC127Q96BQ5 260 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 DNAJC25Q9H1X3 360 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 DMAC2Q9NW81 257 aa20.58■□□□□ 0.88
FBXO28-205ENST00000523990 NRG2O14511 850 aaPredicted RBP20.57■□□□□ 0.88
FBXO28-205ENST00000523990 MYO1EQ12965 1108 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 SNW1Q13573 536 aaKnown RBP20.57■□□□□ 0.88
FBXO28-205ENST00000523990 IQCEQ6IPM2 695 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 POTEHQ6S545 545 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 PARM1Q6UWI2 310 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 MTSS1LQ765P7 747 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 PDZD4Q76G19 769 aaPredicted RBP20.57■□□□□ 0.88
FBXO28-205ENST00000523990 HS6ST3Q8IZP7 471 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 SLC44A3Q8N4M1 653 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 TOP6BLQ8N6T0 577 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 ST13P5Q8NFI4 369 aaPredicted RBP20.57■□□□□ 0.88
FBXO28-205ENST00000523990 SPATA18Q8TC71 538 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 TCEAL4Q96EI5 215 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 HPDLQ96IR7 371 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 ZNF512Q96ME7 567 aaPredicted RBP20.57■□□□□ 0.88
FBXO28-205ENST00000523990 SLC27A5Q9Y2P5 690 aa20.57■□□□□ 0.88
FBXO28-205ENST00000523990 GREB1Q4ZG55 1949 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 GOLGA6L4A6NEF3 574 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 CASP4P49662 377 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 LRRTM3Q86VH5 581 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 SUGP1Q8IWZ8 645 aaKnown RBP20.56■□□□□ 0.88
FBXO28-205ENST00000523990 ADGRF2Q8IZF7 708 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 LEMD2Q8NC56 503 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 ENGASEQ8NFI3 743 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 PLEKHO2Q8TD55 490 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 C2orf15Q8WU43 125 aaKnown RBP20.56■□□□□ 0.88
FBXO28-205ENST00000523990 CCDC34Q96HJ3 373 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 ASAH2Q9NR71 780 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 DDX43Q9NXZ2 648 aaKnown RBP20.56■□□□□ 0.88
FBXO28-205ENST00000523990 GDE1Q9NZC3 331 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 R3HCC1Q9Y3T6 440 aaKnown RBP20.56■□□□□ 0.88
FBXO28-205ENST00000523990 ARIH1Q9Y4X5 557 aaPredicted RBP20.56■□□□□ 0.88
FBXO28-205ENST00000523990 VPS13AQ96RL7 3174 aa20.56■□□□□ 0.88
FBXO28-205ENST00000523990 ZNF197O14709 1029 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 SOAT2O75908 522 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 MICAL2O94851 1124 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 KIF20AO95235 890 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 NR3C1P04150 777 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 SRFP11831 508 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 ALDH1A3P47895 512 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 TSPY1Q01534 308 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 FAM160A1Q05DH4 1040 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 SMARCB1Q12824 385 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 PNOCQ13519 176 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 SOWAHAQ2M3V2 549 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 LIMS2Q7Z4I7 341 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 OSTM1Q86WC4 334 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 TMC8Q8IU68 726 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 SPPL2BQ8TCT7 592 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 ZNF516Q92618 1163 aa20.55■□□□□ 0.88
FBXO28-205ENST00000523990 ACBD6Q9BR61 282 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms