RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 EPS8L1Q8TE68 723 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 TAF4BQ92750 862 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 VWCEQ96DN2 955 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 DPEP3Q9H4B8 488 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 GUCA1BQ9UMX6 200 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 TTC3P53804 2025 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 MACROD2A1Z1Q3 448 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 ADORA2BP29275 332 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 MAGEA1P43355 309 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 CASD1Q96PB1 797 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 NT5C1AQ9BXI3 368 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 PPP2R2CQ9Y2T4 447 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 ANO9A1A5B4 782 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 NRP1O14786 923 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 CFHP08603 1231 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 CYP3A5P20815 502 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 ACO1P21399 889 aaKnown RBP9.96□□□□□ -0.81
SDCBP-212ENST00000523483 NAB2Q15742 525 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 MEA1Q16626 185 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 PTPROQ16827 1216 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 HS1BP3Q53T59 392 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 FAM171A1Q5VUB5 890 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 ALKBH5Q6P6C2 394 aaKnown RBP9.96□□□□□ -0.81
SDCBP-212ENST00000523483 TMEM173Q86WV6 379 aaPredicted RBP9.96□□□□□ -0.81
SDCBP-212ENST00000523483 LRRC43Q8N309 656 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 PDCL2Q8N4E4 241 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 CPA5Q8WXQ8 436 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 FAM81BQ96LP2 452 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 AGPAT1Q99943 283 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 DDX43Q9NXZ2 648 aaKnown RBP9.96□□□□□ -0.81
SDCBP-212ENST00000523483 TRIM10Q9UDY6 481 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 SLC4A7Q9Y6M7 1214 aa9.96□□□□□ -0.81
SDCBP-212ENST00000523483 ATP2C2O75185 946 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 DNAJB2P25686 324 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 SLC11A1P49279 550 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 NAA35Q5VZE5 725 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 KIAA1841Q6NSI8 718 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 UBA3Q8TBC4 463 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 TOP1MTQ969P6 601 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
SDCBP-212ENST00000523483 PACSIN1Q9BY11 444 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 MRPL9Q9BYD2 267 aaKnown RBP9.96□□□□□ -0.82
SDCBP-212ENST00000523483 ELOVL4Q9GZR5 314 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 SYNCQ9H7C4 482 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 TAS2R14Q9NYV8 317 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.96□□□□□ -0.82
SDCBP-212ENST00000523483 BARX2Q9UMQ3 279 aaPredicted RBP9.96□□□□□ -0.82
SDCBP-212ENST00000523483 NR2E3Q9Y5X4 410 aa9.96□□□□□ -0.82
SDCBP-212ENST00000523483 BZW2Q9Y6E2 419 aaKnown RBP9.96□□□□□ -0.82
SDCBP-212ENST00000523483 LRPAP1P30533 357 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 RPL9P32969 192 aaKnown RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 TMEM176AQ96HP8 235 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 MED10Q9BTT4 135 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 ELAC1Q9H777 363 aaKnown RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 MYO1AQ9UBC5 1043 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 ODC1P11926 461 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 CCDC130P13994 396 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 NOP2P46087 812 aaKnown RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 DNA2P51530 1060 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 RABGGTBP53611 331 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 BPIFB4P59827 614 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 METTL23Q86XA0 190 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 COLGALT2Q8IYK4 626 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 KIAA1524Q8TCG1 905 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 ZNF606Q8WXB4 792 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 TFAP2BQ92481 460 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 SYN2Q92777 582 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 MYO6Q9UM54 1294 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 ADGRG1Q9Y653 693 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 ANK1P16157 1881 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 GRXCR1A8MXD5 290 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 M0QYV0 167 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 DDX3XO00571 662 aaKnown RBP eCLIP9.95□□□□□ -0.824e-16■□□□□ 11.2
SDCBP-212ENST00000523483 TLL1O43897 1013 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 CILPO75339 1184 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 OR4Q2P0C623 313 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 ATP2A2P16615 1042 aaKnown RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 RAD23BP54727 409 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 KRT83P78385 493 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 IFRD2Q12894 506 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 SLC18A3Q16572 532 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 TMEM240Q5SV17 173 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 DCLRE1AQ6PJP8 1040 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 FMNL3Q8IVF7 1028 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 LNX1Q8TBB1 728 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 CYFIP2Q96F07 1278 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 IRX2Q9BZI1 471 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-212ENST00000523483 GTF3C4Q9UKN8 822 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 CEP83Q9Y592 693 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 DUSP10Q9Y6W6 482 aa9.95□□□□□ -0.82
SDCBP-212ENST00000523483 ZNF263O14978 683 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 ZSCAN12O43309 604 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 BUB1O43683 1085 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 DGKIO75912 1065 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 ABL1P00519 1130 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 PFKMP08237 780 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 TKTP29401 623 aaKnown RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 HNRNPH3P31942 346 aaKnown RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 YWHAHQ04917 246 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms