RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 ZNF263O14978 683 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 KINO60870 393 aaKnown RBP13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 LDHAP00338 332 aaKnown RBP13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 GARTP22102 1010 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 GDI1P31150 447 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 TAF6P49848 677 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 CSTF1Q05048 431 aaKnown RBP13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 ALCAMQ13740 583 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 GRM2Q14416 872 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 L1TD1Q5T7N2 865 aaKnown RBP13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 CCDC73Q6ZRK6 1079 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 METTL23Q86XA0 190 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 SFR1Q86XK3 245 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 THEM5Q8N1Q8 247 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 OR10T2Q8NGX3 314 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 PGLYRP2Q96PD5 576 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 ACCSQ96QU6 501 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 MKNK1Q9BUB5 465 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 CHRDQ9H2X0 955 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 SPTBN4Q9H254 2564 aa13.67□□□□□ -0.22
TOP1MT-217ENST00000523417 ZNF292O60281 2723 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 A0A1W2PRU2 124 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 VPS37CA5D8V6 355 aaPredicted RBP13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 KPNA7A9QM74 516 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 TISP43B9A030 160 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 TDGF1P13385 188 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 GJA1P17302 382 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 TXLNAP40222 546 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 PNPLA4P41247 253 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 ID4P47928 161 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 NRLP54845 237 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 ARID3BQ8IVW6 561 aaPredicted RBP13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 CXorf38Q8TB03 319 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 SPATA18Q8TC71 538 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 SPPL2BQ8TCT7 592 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 POMGNT1Q8WZA1 660 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 FAM3CQ92520 227 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 CLIC6Q96NY7 704 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 TMEM209Q96SK2 561 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 C8orf33Q9H7E9 229 aaPredicted RBP13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 MRPL44Q9H9J2 332 aaKnown RBP13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 MYH15Q9Y2K3 1946 aa13.66□□□□□ -0.22
TOP1MT-217ENST00000523417 OTOGLQ3ZCN5 2332 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 MYH11P35749 1972 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 KIAA0391O15091 583 aaKnown RBP13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 HAPLN1P10915 354 aaPredicted RBP13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 CHRNB1P11230 501 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 NASPP49321 788 aaPredicted RBP13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 KCNA1Q09470 495 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 MTAPQ13126 283 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 SLC39A12Q504Y0 691 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 WSCD1Q658N2 575 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 BRSK2Q8IWQ3 736 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 EFCAB13Q8IY85 973 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 DCP1BQ8IZD4 617 aaKnown RBP13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 GPR161Q8N6U8 529 aaKnown RBP13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 RSPRY1Q96DX4 576 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 LRRC3BQ96PB8 259 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 EPC1Q9H2F5 836 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 TASP1Q9H6P5 420 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 TMEM206Q9H813 350 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 LMAN1LQ9HAT1 526 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 IL21Q9HBE4 155 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 PIAS3Q9Y6X2 628 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 DMDP11532 3685 aa13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 PDCD11Q14690 1871 aaKnown RBP13.65□□□□□ -0.22
TOP1MT-217ENST00000523417 MYBPHLA2RUH7 354 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 PDIA4P13667 645 aaKnown RBP13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 CDC25CP30307 473 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 SV2CQ496J9 727 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 ARHGAP29Q52LW3 1261 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 ARHGAP15Q53QZ3 475 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 CNNM4Q6P4Q7 775 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 LIMS2Q7Z4I7 341 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 RALGPS2Q86X27 583 aaPredicted RBP13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 TTC9BQ8N6N2 239 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 USP28Q96RU2 1077 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 ACBD6Q9BR61 282 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 PYM1Q9BRP8 204 aaKnown RBP13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 LRRC27Q9C0I9 530 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 IKZF4Q9H2S9 585 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 ATXN3LQ9H3M9 355 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 GDAP2Q9NXN4 497 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 GPR179Q6PRD1 2367 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 NCANO14594 1321 aa13.64□□□□□ -0.23
TOP1MT-217ENST00000523417 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 FANCMQ8IYD8 2048 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 EXTL3O43909 919 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 ATF6P18850 670 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 GABRR2P28476 465 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms