RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ZBP1Q9H171 429 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 EPC1Q9H2F5 836 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 ZCCHC4Q9H5U6 513 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 ATP6V0A4Q9HBG4 840 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 C1orf112Q9NSG2 853 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 ERAP1Q9NZ08 941 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 SPG21Q9NZD8 308 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 IGSF9Q9P2J2 1179 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 ST3GAL5Q9UNP4 418 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 SIT1Q9Y3P8 196 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 IGF2RP11717 2491 aa7.58□□□□□ -1.2
SDCBP-210ENST00000522843 A0A0D9SFI3 127 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 SLC30A4O14863 429 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ZBTB5O15062 677 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 DHX16O60231 1041 aaKnown RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 STAM2O75886 525 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 PARP1P09874 1014 aaKnown RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 BMP7P18075 431 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 PMLP29590 882 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 PPM1AP35813 382 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 LIG3P49916 1009 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 RPS26P62854 115 aaKnown RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 DLG4P78352 724 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 DAB2P98082 770 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 TAGLNQ01995 201 aaKnown RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 KRT17Q04695 432 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 LETM2Q2VYF4 491 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ZNF528Q3MIS6 628 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 AGMOQ6ZNB7 445 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ZNF589Q86UQ0 364 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 FAM228AQ86W67 206 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 IRF2BP1Q8IU81 584 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 SAMD3Q8N6K7 520 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ENAHQ8N8S7 591 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ZBTB44Q8NCP5 570 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ST13P5Q8NFI4 369 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 PJA1Q8NG27 643 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 SEPT1Q8WYJ6 367 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 FAM227BQ96M60 508 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 MYADMQ96S97 322 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ELAC1Q9H777 363 aaKnown RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 SP110Q9HB58 689 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ARHGEF3Q9NR81 526 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 MTF2Q9Y483 593 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 IRAK3Q9Y616 596 aa7.57□□□□□ -1.2
SDCBP-210ENST00000522843 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.57□□□□□ -1.2
SDCBP-210ENST00000522843 ZMYM6O95789 1325 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 SMIM35A0A1B0GVV1 85 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 DENND3A2RUS2 1198 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 RRN3P2A6NIE6 340 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 WASH4PA8MWX3 477 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 CYTH3O43739 400 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 FOXD2O60548 495 aaPredicted RBP7.56□□□□□ -1.2
SDCBP-210ENST00000522843 RPS6KA5O75582 802 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 METAP2P50579 478 aaKnown RBP eCLIP7.56□□□□□ -1.2
SDCBP-210ENST00000522843 PSMD2Q13200 908 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 MTHFD1LQ6UB35 978 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 MFSD6Q6ZSS7 791 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 CABP7Q86V35 215 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 KIAA0319LQ8IZA0 1049 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 LILRA2Q8N149 483 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 VPS52Q8N1B4 723 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 LRRC43Q8N309 656 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 PDZD8Q8NEN9 1154 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 GLG1Q92896 1179 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 GPATCH3Q96I76 525 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 PIGSQ96S52 555 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 SLC6A17Q9H1V8 727 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 SMARCAD1Q9H4L7 1026 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 DCTPP1Q9H773 170 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 KAT14Q9H8E8 782 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 SFXN1Q9H9B4 322 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 EPS15L1Q9UBC2 864 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 MAD2L2Q9UI95 211 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 DDX19BQ9UMR2 479 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 USP18Q9UMW8 372 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 GINS2Q9Y248 185 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 PCDHGA2Q9Y5H1 932 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 MIA3Q5JRA6 1907 aa7.56□□□□□ -1.2
SDCBP-210ENST00000522843 TTC41PQ6P2S7 1318 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 SALL3Q9BXA9 1300 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 FLNBO75369 2602 aaKnown RBP7.55□□□□□ -1.2
SDCBP-210ENST00000522843 KLRF2D3W0D1 207 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 ANHXE9PGG2 379 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 M0QZ92 97 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 GFRA2O00451 464 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 B4GALT3O60512 393 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 RPLP2P05387 115 aaKnown RBP7.55□□□□□ -1.2
SDCBP-210ENST00000522843 CTSAP10619 480 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 TFE3P19532 575 aaPredicted RBP7.55□□□□□ -1.2
SDCBP-210ENST00000522843 TPP2P29144 1249 aaPredicted RBP7.55□□□□□ -1.2
SDCBP-210ENST00000522843 CA8P35219 290 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 CLCN4P51793 760 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 BCAR1P56945 870 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 STARD6P59095 220 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 CSTF1Q05048 431 aaKnown RBP7.55□□□□□ -1.2
SDCBP-210ENST00000522843 PTPN14Q15678 1187 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 DCLRE1AQ6PJP8 1040 aa7.55□□□□□ -1.2
SDCBP-210ENST00000522843 USP17L6PQ6QN14 398 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms