RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 MYH15Q9Y2K3 1946 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-211ENST00000522802 GSTTP1A0A1W2PQM5 241 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 DENND3A2RUS2 1198 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 GCOM1H8Y6P7 765 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-211ENST00000522802 M0QZ92 97 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 ZBTB5O15062 677 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 ATP9AO75110 1047 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 PARP1P09874 1014 aaKnown RBP7.23□□□□□ -1.25
VPS13B-211ENST00000522802 POLR2MP0CAP2 368 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 INSRRP14616 1297 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 KCNA2P16389 499 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 PPP2R5EQ16537 467 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 ANKRD39Q53RE8 183 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 KCNT2Q6UVM3 1135 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 MFSD6Q6ZSS7 791 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 CCDC149Q6ZUS6 474 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 TMEM173Q86WV6 379 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-211ENST00000522802 DGKHQ86XP1 1220 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 HOMER1Q86YM7 354 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 MTMR8Q96EF0 704 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 HRASLS5Q96KN8 279 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 ZNF558Q96NG5 402 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 PPP1R16BQ96T49 567 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 PCYT2Q99447 389 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 CELF4Q9BZC1 486 aaKnown RBP7.23□□□□□ -1.25
VPS13B-211ENST00000522802 RGS18Q9NS28 235 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 NCDNQ9UBB6 729 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 PUF60Q9UHX1 559 aaKnown RBP7.23□□□□□ -1.25
VPS13B-211ENST00000522802 GINS2Q9Y248 185 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 NOC2LQ9Y3T9 749 aaKnown RBP7.23□□□□□ -1.25
VPS13B-211ENST00000522802 SQORQ9Y6N5 450 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 EVPLQ92817 2033 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 LOC400499M0QZD8 3231 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 TTC41PQ6P2S7 1318 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 KDM3AQ9Y4C1 1321 aa7.23□□□□□ -1.25
VPS13B-211ENST00000522802 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
VPS13B-211ENST00000522802 KLRF2D3W0D1 207 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 KINO60870 393 aaKnown RBP7.22□□□□□ -1.25
VPS13B-211ENST00000522802 ATP2B1P20020 1258 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 PPM1AP35813 382 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 BNIP3Q12983 259 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 PLCB4Q15147 1175 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 BBS9Q3SYG4 887 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 CLLU1OSQ5K130 101 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 ATAT1Q5SQI0 421 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 SLC24A5Q71RS6 500 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 THAP5Q7Z6K1 395 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 PPFIBP1Q86W92 1011 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 C1orf210Q8IVY1 113 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 SLC39A11Q8N1S5 342 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 LRRC43Q8N309 656 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 SLC22A17Q8WUG5 538 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 ASB11Q8WXH4 323 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 ESR2Q92731 530 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 GLG1Q92896 1179 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 CASD1Q96PB1 797 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 SFXN1Q9H9B4 322 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 PARD6AQ9NPB6 346 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 C1orf112Q9NSG2 853 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 TMEM161AQ9NX61 479 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 MAP3K20Q9NYL2 800 aaKnown RBP7.22□□□□□ -1.25
VPS13B-211ENST00000522802 SPG21Q9NZD8 308 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 ST3GAL5Q9UNP4 418 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 SMG5Q9UPR3 1016 aaKnown RBP7.22□□□□□ -1.25
VPS13B-211ENST00000522802 SLC5A6Q9Y289 635 aa7.22□□□□□ -1.25
VPS13B-211ENST00000522802 LAMA1P25391 3075 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 B4E1Z4 1266 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 NT5C1B-RDH14C9J2C7 533 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 RPS6KA5O75582 802 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 STAM2O75886 525 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 WNT11O96014 354 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 PCP11498 1178 aaKnown RBP7.21□□□□□ -1.26
VPS13B-211ENST00000522802 ITGB5P18084 799 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 TGM1P22735 817 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 METAP2P50579 478 aaKnown RBP eCLIP7.21□□□□□ -1.26
VPS13B-211ENST00000522802 KRT17Q04695 432 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 AUHQ13825 339 aaKnown RBP7.21□□□□□ -1.26
VPS13B-211ENST00000522802 ACAP1Q15027 740 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 AXDND1Q5T1B0 1012 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-211ENST00000522802 OTOP3Q7RTS5 596 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 GPR149Q86SP6 731 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 CABP7Q86V35 215 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 FAM228AQ86W67 206 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 ST13P5Q8NFI4 369 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-211ENST00000522802 PJA1Q8NG27 643 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 UBE2FQ969M7 185 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 CHAMP1Q96JM3 812 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 PIGSQ96S52 555 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 SENP7Q9BQF6 1050 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 TMEM117Q9H0C3 514 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 ZBP1Q9H171 429 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 ATP6V0A4Q9HBG4 840 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 ARHGEF3Q9NR81 526 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 WNT16Q9UBV4 365 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 MAD2L2Q9UI95 211 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 PCDHB10Q9UN67 800 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 SIT1Q9Y3P8 196 aa7.21□□□□□ -1.26
VPS13B-211ENST00000522802 PCDHA2Q9Y5H9 948 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms