RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 SLITRK1Q96PX8 696 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 JPH2Q9BR39 696 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TRAIPQ9BWF2 469 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 PDGFCQ9NRA1 345 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CTNNAL1Q9UBT7 734 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 PCNTO95613 3336 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 INO80B-WBP1J3KQ70 363 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CPP00450 1065 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 KRT1P04264 644 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 RAP1GAPP47736 663 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ZFYVE27Q5T4F4 411 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 RNF187Q5TA31 235 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ATF7IP2Q5U623 682 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 MFSD5Q6N075 450 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TSHZ1Q6ZSZ6 1077 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 PLPPR4Q7Z2D5 763 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 EXOC3L1Q86VI1 746 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 C3orf20Q8ND61 904 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 KAT2BQ92831 832 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 SEC16BQ96JE7 1060 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 INO80BQ9C086 356 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 NINJ2Q9NZG7 142 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TJP2Q9UDY2 1190 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 LSM8O95777 96 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TTC4O95801 387 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CALB1P05937 261 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 IQCF3P0C7M6 154 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CXCL8P10145 99 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CREB1P16220 341 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ATF7P17544 494 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 KLRC2P26717 231 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 PPP1R15BQ5SWA1 713 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 WDR78Q5VTH9 848 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 IZUMO3Q5VZ72 239 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CCDC62Q6P9F0 684 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ZNF365Q70YC5 407 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TMEM35BQ8NCS4 154 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 IPO4Q8TEX9 1081 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CHMP6Q96FZ7 201 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ZNF317Q96PQ6 595 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 FHDC1Q9C0D6 1143 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 FZD8Q9H461 694 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ADARB2Q9NS39 739 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 HOMER3Q9NSC5 361 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 NXF1Q9UBU9 619 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 DNPEPQ9ULA0 475 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 PPME1Q9Y570 386 aa11.39□□□□□ -0.59
RAB11FIP1-204ENST00000522774 SBF1O95248 1867 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 DNAJC25-GNG10A0A024R161 153 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ACKR2O00590 384 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 SLC25A27O95847 323 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 IREB2P48200 963 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CDR1P51861 262 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ORC1Q13415 861 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TTC31Q49AM3 519 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 PPP1R2P3Q6NXS1 205 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 DENND1BQ6P3S1 775 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 DCUN1D2Q6PH85 259 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 YTHDF3Q7Z739 585 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CPLX4Q7Z7G2 160 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CROCCP2Q86T23 111 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ERO1BQ86YB8 467 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 MMP19Q99542 508 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ROPN1BQ9BZX4 212 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 C2orf40Q9H1Z8 148 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CDT1Q9H211 546 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ROPN1Q9HAT0 212 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TMEM51Q9NW97 253 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CYTH4Q9UIA0 394 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 GGA2Q9UJY4 613 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 LIASO43766 372 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ZSCAN5DPP0CG00 497 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 MBTD1Q05BQ5 628 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 SLC20A2Q08357 652 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 SF3A3Q12874 501 aaKnown RBP eCLIP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 MOGSQ13724 837 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 SPRED3Q2MJR0 410 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 GJC2Q5T442 439 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 EFCAB12Q6NXP0 572 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 GSTA5Q7RTV2 222 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ERICH1Q86X53 443 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 RCOR2Q8IZ40 523 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 HAUS1Q96CS2 278 aa11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 PRMT1Q99873 361 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 INTS9Q9NV88 658 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP1-204ENST00000522774 KRT19P08727 400 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 TXNP10599 105 aaKnown RBP11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CETPP11597 493 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 ETS1P14921 441 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 IFNAR2P48551 515 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CDH8P55286 799 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 CAV1Q03135 178 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 KCTD2Q14681 263 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 P3H1Q32P28 736 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 PTPN20Q4JDL3 420 aa11.37□□□□□ -0.59
RAB11FIP1-204ENST00000522774 SPOCD1Q6ZMY3 1216 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms