RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ZNF423Q2M1K9 1284 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 SLC27A1Q6PCB7 646 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 CASC1Q6TDU7 716 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 ANKS3Q6ZW76 656 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 SYT13Q7L8C5 426 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 CYP2U1Q7Z449 544 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 ZNF605Q86T29 641 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 SGMS1Q86VZ5 419 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 MARCH9Q86YJ5 346 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 FAM200AQ8TCP9 573 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 ASAP3Q8TDY4 903 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 ADAMTS14Q8WXS8 1223 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 SLC7A3Q8WY07 619 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 TMEM87BQ96K49 555 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 CEP170P1Q96L14 293 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 UBL7Q96S82 380 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 JPH2Q9BR39 696 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 TEKT3Q9BXF9 490 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 TRIM6Q9C030 488 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 DNAJC25Q9H1X3 360 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 HPS4Q9NQG7 708 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 IGSF5Q9NSI5 407 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 BRPF3Q9ULD4 1205 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 MAP4K5Q9Y4K4 846 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 PTPRDP23468 1912 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 ADAMTS9Q9P2N4 1935 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 MYO9AB2RTY4 2548 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ESYT2A0FGR8 921 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 hCG_1984214I3L0E3 225 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ATXN7O15265 892 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ASAP2O43150 1006 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 B3GAT3O94766 335 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 APBB3O95704 486 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 PRKCBP05771 671 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 U2AF2P26368 475 aaKnown RBP eCLIP9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ELF1P32519 619 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 MCM5P33992 734 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 PTGER3P43115 390 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 SMCPP49901 116 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ARPP19P56211 112 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 LMAN2Q12907 356 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 HDAC1Q13547 482 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ARID5BQ14865 1188 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 EMC2Q15006 297 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 KARSQ15046 597 aaKnown RBP9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 UPP1Q16831 310 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ARHGAP29Q52LW3 1261 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 PCSK4Q6UW60 755 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 GAREM2Q75VX8 874 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ZNF713Q8N859 430 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 FRMD1Q8N878 549 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 OR2I1PQ8NGU4 316 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ETNPPLQ8TBG4 499 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ZNF592Q92610 1267 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 ZNF512Q96ME7 567 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 FNBP1Q96RU3 617 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 FAM83CQ9BQN1 747 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 GPR88Q9GZN0 384 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 CRISPLD1Q9H336 500 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 SLITRK6Q9H5Y7 841 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 DKK4Q9UBT3 224 aa9.8□□□□□ -0.84
TRAPPC9-212ENST00000521944 TNRC6BQ9UPQ9 1833 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 TRIP11Q15643 1979 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 TBX3O15119 743 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 RECQL4O94761 1208 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 CDC27P30260 824 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 DHPSP49366 369 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 GALK1P51570 392 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 POU5F1BQ06416 359 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 SOX4Q06945 474 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 SRSF1Q07955 248 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 GRSF1Q12849 480 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 NR5A1Q13285 461 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 CAPSQ13938 189 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 DMC1Q14565 340 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 PFKFB3Q16875 520 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 ITPRIPL2Q3MIP1 535 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 IQCEQ6IPM2 695 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 APOA5Q6Q788 366 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 SLCO6A1Q86UG4 719 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 RASSF3Q86WH2 238 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 HACE1Q8IYU2 909 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 REXO1Q8N1G1 1221 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 LEMD2Q8NC56 503 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 RPLP0P6Q8NHW5 317 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 PPP1R10Q96QC0 940 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 POLR3CQ9BUI4 534 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 TPSD1Q9BZJ3 242 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 GOLGA2P5Q9HBQ8 144 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 ASAH2Q9NR71 780 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 FBXL5Q9UKA1 691 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 USP20Q9Y2K6 914 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 PCDH15Q96QU1 1955 aa9.79□□□□□ -0.84
TRAPPC9-212ENST00000521944 J3QKU1 62 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 ARHGAP6O43182 974 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 FTH1P19P0C7X4 201 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 HNRNPLP14866 589 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 GLRA2P23416 452 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 ARL2P36404 184 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms