RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 RPS9P46781 194 aaKnown RBP12.12□□□□□ -0.47
CSMD1-210ENST00000521646 SOX9P48436 509 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 PUM1Q14671 1186 aaKnown RBP eCLIP12.12□□□□□ -0.47
CSMD1-210ENST00000521646 TMEM132AQ24JP5 1023 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 TTC38Q5R3I4 469 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 ZC3H14Q6PJT7 736 aaKnown RBP12.12□□□□□ -0.47
CSMD1-210ENST00000521646 TXNDC11Q6PKC3 985 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 ANKS3Q6ZW76 656 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 C1orf186Q6ZWK4 172 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 TMC8Q8IU68 726 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 TCEAL8Q8IYN2 117 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 IGSF22Q8N9C0 903 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 SHKBP1Q8TBC3 707 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 ELSPBP1Q96BH3 223 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 SHDQ96IW2 340 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 TMEM209Q96SK2 561 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 ADPGKQ9BRR6 497 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 RBM12Q9NTZ6 932 aaKnown RBP12.12□□□□□ -0.47
CSMD1-210ENST00000521646 ZSCAN32Q9NX65 697 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 CNTN3Q9P232 1028 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 PCDHGA2Q9Y5H1 932 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 TIMM13Q9Y5L4 95 aaPredicted RBP12.12□□□□□ -0.47
CSMD1-210ENST00000521646 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 KIF26AQ9ULI4 1882 aaPredicted RBP12.11□□□□□ -0.47
CSMD1-210ENST00000521646 NPHP3-ACAD11A0A0J9YXS1 232 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 SLC16A4O15374 487 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 SOAT2O75908 522 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 CHRNB1P11230 501 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 HARSP12081 509 aaKnown RBP12.11□□□□□ -0.47
CSMD1-210ENST00000521646 TNFSF9P41273 254 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 EPHA5P54756 1037 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 SATB1Q01826 763 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 ADCY1Q08828 1119 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 RAD51AP2Q09MP3 1159 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 TWF1Q12792 350 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 ANKRD1Q15327 319 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 TEAD2Q15562 447 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 ZNF568Q3ZCX4 644 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 RINT1Q6NUQ1 792 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 Q6ZS52 159 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 Q6ZVU0 165 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 CHFRQ96EP1 664 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 SUSD3Q96L08 255 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 TBC1D32Q96NH3 1257 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 PNMA5Q96PV4 448 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 CHRDQ9H2X0 955 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 CYP4F11Q9HBI6 524 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 ZNF334Q9HCZ1 680 aaPredicted RBP12.11□□□□□ -0.47
CSMD1-210ENST00000521646 ZZEF1O43149 2961 aa12.11□□□□□ -0.47
CSMD1-210ENST00000521646 DCDC2BA2VCK2 349 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 K7ERI5 159 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 ERVH48-1M5A8F1 160 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 FAM189A1O60320 539 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 CXCL8P10145 99 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 PTPN2P17706 415 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 EFNA5P52803 228 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 PFKPQ01813 784 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 SCARA3Q6AZY7 606 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 PKN3Q6P5Z2 889 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 PDXDC1Q6P996 788 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 TMEM161BQ8NDZ6 487 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 BEST2Q8NFU1 509 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 FBXO18Q8NFZ0 1043 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 KIFAP3Q92845 792 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 UROC1Q96N76 676 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 PGLYRP2Q96PD5 576 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.1□□□□□ -0.47
CSMD1-210ENST00000521646 SPEGQ15772 3267 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 CHD6Q8TD26 2715 aa12.1□□□□□ -0.47
CSMD1-210ENST00000521646 SDK1Q7Z5N4 2213 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 K7ESF4 209 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 PRRG1O14668 218 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 GDI1P31150 447 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 RELBQ01201 579 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 PPP2R5AQ15172 486 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 ZBTB6Q15916 424 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 CTXN3Q4LDR2 81 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 ZNF852Q6ZMS4 543 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 GAREM2Q75VX8 874 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 RIN3Q8TB24 985 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 ZSCAN18Q8TBC5 510 aaPredicted RBP12.09□□□□□ -0.47
CSMD1-210ENST00000521646 SNX29Q8TEQ0 813 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 DNASE1L2Q92874 299 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 ZFYVE19Q96K21 471 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 C8orf76Q96K31 380 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 PLIN2Q99541 437 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 IKZF4Q9H2S9 585 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 FOXP1Q9H334 677 aaPredicted RBP12.09□□□□□ -0.47
CSMD1-210ENST00000521646 POLR3BQ9NW08 1133 aaPredicted RBP12.09□□□□□ -0.47
CSMD1-210ENST00000521646 NCDNQ9UBB6 729 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 LRWD1Q9UFC0 647 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 YIPF1Q9Y548 306 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 PIAS3Q9Y6X2 628 aa12.09□□□□□ -0.47
CSMD1-210ENST00000521646 FIGNL2A6NMB9 653 aa12.08□□□□□ -0.48
CSMD1-210ENST00000521646 HEPACAM2A8MVW5 462 aa12.08□□□□□ -0.48
CSMD1-210ENST00000521646 SYN3O14994 580 aa12.08□□□□□ -0.48
CSMD1-210ENST00000521646 PRAMEF12O95522 483 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms