RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 TATDN2Q93075 761 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 PPP2R3CQ969Q6 453 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 PABPC5Q96DU9 382 aaKnown RBP13.28□□□□□ -0.28
CLK4-208ENST00000520957 LPIN3Q9BQK8 851 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 THAP9Q9H5L6 903 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLK4-208ENST00000520957 RAB20Q9NX57 234 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLK4-208ENST00000520957 PDCD11Q14690 1871 aaKnown RBP13.28□□□□□ -0.28
CLK4-208ENST00000520957 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 H7C4K7 107 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 CLSTN1O94985 981 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 LETM1O95202 739 aaPredicted RBP13.28□□□□□ -0.28
CLK4-208ENST00000520957 VNN2O95498 520 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 ADH1AP07327 375 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 PDGFRBP09619 1106 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 WEE2P0C1S8 567 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 PAX3P23760 479 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 ATICP31939 592 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 ROR1Q01973 937 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 RAB33AQ14088 237 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 ZNF280DQ6N043 979 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 SYCE2Q6PIF2 218 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 RNF19BQ6ZMZ0 732 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 DHX40Q8IX18 779 aaKnown RBP13.28□□□□□ -0.28
CLK4-208ENST00000520957 ADGRF2Q8IZF7 708 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 AOPEPQ8N6M6 819 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 FBXL13Q8NEE6 735 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 HLA-CQ95604 372 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 CDCA3Q99618 268 aaPredicted RBP13.28□□□□□ -0.28
CLK4-208ENST00000520957 UBE2ZQ9H832 354 aaPredicted RBP13.28□□□□□ -0.28
CLK4-208ENST00000520957 VRTNQ9H8Y1 702 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 COQ4Q9Y3A0 265 aa13.28□□□□□ -0.28
CLK4-208ENST00000520957 KCNJ18B7U540 433 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 GABRDO14764 452 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 STX10O60499 249 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 RFPL2O75678 378 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 SEC24AO95486 1093 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 STAU1O95793 577 aaKnown RBP13.27□□□□□ -0.29
CLK4-208ENST00000520957 ASPAP45381 313 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 MTIF2P46199 727 aaKnown RBP13.27□□□□□ -0.29
CLK4-208ENST00000520957 MYL5Q02045 173 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 APBA1Q02410 837 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 KCNJ12Q14500 433 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 ZNF667Q5HYK9 610 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 CDKAL1Q5VV42 579 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 PDXDC1Q6P996 788 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 LMO3Q8TAP4 145 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 ARID3AQ99856 593 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 CRACR2AQ9BSW2 395 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 CRISPLD1Q9H336 500 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 TMLHEQ9NVH6 421 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 DDX43Q9NXZ2 648 aaKnown RBP13.27□□□□□ -0.29
CLK4-208ENST00000520957 DSEQ9UL01 958 aa13.27□□□□□ -0.29
CLK4-208ENST00000520957 VWA8A3KMH1 1905 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 ABLIM3O94929 683 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 GLUD1P00367 558 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 AFPP02771 609 aaKnown RBP13.26□□□□□ -0.29
CLK4-208ENST00000520957 ZNF165P49910 485 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 TNNC1P63316 161 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 NOP14P78316 857 aaKnown RBP13.26□□□□□ -0.29
CLK4-208ENST00000520957 ORC1Q13415 861 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 IQCB1Q15051 598 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 TCP11X2Q5H9J9 407 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 MIIPQ5JXC2 388 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 TMEM184AQ6ZMB5 413 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 DPH6Q7L8W6 267 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 METTL23Q86XA0 190 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 TTC9BQ8N6N2 239 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 ATAD1Q8NBU5 361 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 KREMEN2Q8NCW0 462 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 ZNF461Q8TAF7 563 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 MSLNLQ96KJ4 702 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 TUBGCP2Q9BSJ2 902 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 DPEP3Q9H4B8 488 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 MAN1C1Q9NR34 630 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 TAB2Q9NYJ8 693 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 ATG2AQ2TAZ0 1938 aa13.26□□□□□ -0.29
CLK4-208ENST00000520957 MYBPHLA2RUH7 354 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 ATP1A3P13637 1013 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 CPB1P15086 417 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 GNL1P36915 607 aaPredicted RBP13.25□□□□□ -0.29
CLK4-208ENST00000520957 PSMC1P62191 440 aaKnown RBP13.25□□□□□ -0.29
CLK4-208ENST00000520957 MYL7Q01449 175 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 ADCY1Q08828 1119 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 TMC5Q6UXY8 1006 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 PPFIBP1Q86W92 1011 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 THEM5Q8N1Q8 247 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 OR6B3Q8NGW1 331 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 ZCWPW1Q9H0M4 648 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 S1PR5Q9H228 398 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 CBX8Q9HC52 389 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 MAGEC2Q9UBF1 373 aaPredicted RBP13.25□□□□□ -0.29
CLK4-208ENST00000520957 HMGXB4Q9UGU5 601 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 SLC27A5Q9Y2P5 690 aa13.25□□□□□ -0.29
CLK4-208ENST00000520957 OR6C75A6NL08 312 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms