RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PRPF31Q8WWY3 499 aaKnown RBP5.4□□□□□ -1.54
SDCBP-207ENST00000520168 TCEAL3Q969E4 200 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 LENG9Q96B70 501 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 PRIMPOLQ96LW4 560 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 ZNF512Q96ME7 567 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-207ENST00000520168 UROC1Q96N76 676 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 CORO1BQ9BR76 489 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 EIF2AQ9BY44 585 aaKnown RBP5.4□□□□□ -1.54
SDCBP-207ENST00000520168 LNPKQ9C0E8 428 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 DUSP15Q9H1R2 295 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-207ENST00000520168 UNC45AQ9H3U1 944 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 NXF3Q9H4D5 531 aaKnown RBP5.4□□□□□ -1.54
SDCBP-207ENST00000520168 SMOC1Q9H4F8 434 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 SLITRK6Q9H5Y7 841 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 MINDY3Q9H8M7 445 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 ASAH2Q9NR71 780 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 RBM12Q9NTZ6 932 aaKnown RBP5.4□□□□□ -1.54
SDCBP-207ENST00000520168 CUEDC1Q9NWM3 386 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-207ENST00000520168 MIOSQ9NXC5 875 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 CACNA2D2Q9NY47 1150 aa5.4□□□□□ -1.54
SDCBP-207ENST00000520168 EVLQ9UI08 416 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-207ENST00000520168 OBSL1O75147 1896 aa5.4□□□□□ -1.55
SDCBP-207ENST00000520168 ADAMTS9Q9P2N4 1935 aa5.4□□□□□ -1.55
SDCBP-207ENST00000520168 PLXNB3Q9ULL4 1909 aa5.4□□□□□ -1.55
SDCBP-207ENST00000520168 ATG2BQ96BY7 2078 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CCDC196A0A1B0GTZ2 297 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 A0A1B0GUA9 196 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CAPN8A6NHC0 703 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CASTOR2A6NHX0 329 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 SLC38A8A6NNN8 435 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 ESPNB1AK53 854 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 INO80B-WBP1J3KQ70 363 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CDX4O14627 284 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PSMD10O75832 226 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 STBD1O95210 358 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 FGF19O95750 216 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CAPNS1P04632 268 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 P4HBP07237 508 aaKnown RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 ARF4P18085 180 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 RXRAP19793 462 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 WEE1P30291 646 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 HOXD12P35452 270 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 QARSP47897 775 aaKnown RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 IRX6P78412 446 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 ROR1Q01973 937 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 GRSF1Q12849 480 aaKnown RBP eCLIP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PLD1Q13393 1074 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 EMC2Q15006 297 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PON2Q15165 354 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 RTN1Q16799 776 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PFKFB3Q16875 520 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 COL28A1Q2UY09 1125 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PLA2G4EQ3MJ16 856 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 Q4G0T1 1027 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PMS2CLQ68D20 193 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 MOXD1Q6UVY6 613 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 B3GNT9Q6UX72 402 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CYP2U1Q7Z449 544 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 RABEPKQ7Z6M1 372 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PLEKHM2Q8IWE5 1019 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 TRIM22Q8IYM9 498 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 LSM14AQ8ND56 463 aaKnown RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 DEFB124Q8NES8 71 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 HASPINQ8TF76 798 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 ACDQ96AP0 544 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CCDC136Q96JN2 1154 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CEP170P1Q96L14 293 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 UBL7Q96S82 380 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 TMEM209Q96SK2 561 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PLCD4Q9BRC7 762 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 NUSAP1Q9BXS6 441 aaKnown RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CCDC86Q9H6F5 360 aaKnown RBP5.39□□□□□ -1.55
SDCBP-207ENST00000520168 DKK4Q9UBT3 224 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 PARP2Q9UGN5 583 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 ZMYM5Q9UJ78 669 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 KLK13Q9UKR3 277 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 HES2Q9Y543 173 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 INSL5Q9Y5Q6 135 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 ACACAQ13085 2346 aa5.39□□□□□ -1.55
SDCBP-207ENST00000520168 CCDC194A0A1B0GVG4 234 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 TMEM150BA6NC51 233 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 POM121CA8CG34 1229 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 H7C4K7 107 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 SYN3O14994 580 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 ADAM12O43184 909 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 ZBTB43O43298 467 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 EXTL3O43909 919 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 NPTXRO95502 500 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 APBB3O95704 486 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 TOP3BO95985 862 aaKnown RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 DRD1P21728 446 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 AKAP5P24588 427 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 GBP1P32455 592 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 VIPR2P41587 438 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 RAB15P59190 212 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 SIM1P81133 766 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 MBTD1Q05BQ5 628 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 SCAPQ12770 1279 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 UAP1L1Q3KQV9 507 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 ITPRIPL2Q3MIP1 535 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms