RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PODXLO00592 558 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 NPC1O15118 1278 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 NOBOXO60393 691 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 CDC14BO60729 498 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 A1BGP04217 495 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 INHBBP09529 407 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 GNAT2P19087 354 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 COPAP53621 1224 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 EPHB4P54760 987 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 SURF1Q15526 300 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 EFCAB12Q6NXP0 572 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 FBXO38Q6PIJ6 1188 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 GAS2L3Q86XJ1 694 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 XYLT1Q86Y38 959 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 ANKRD18AQ8IVF6 992 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 LGI4Q8N135 537 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 PAF1Q8N7H5 531 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 TMIEQ8NEW7 156 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 KLHL32Q96NJ5 620 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 DPYSL5Q9BPU6 564 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 STK31Q9BXU1 1019 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 XPNPEP3Q9NQH7 507 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 GJB4Q9NTQ9 266 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 TMEM233B4DJY2 109 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 CCP110O43303 1012 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 KCNQ3O43525 872 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 IPO13O94829 963 aaKnown RBP6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 IDEP14735 1019 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 FDXRP22570 491 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 PPP2CBP62714 309 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 PPP2CAP67775 309 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 PTK2BQ14289 1009 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 SPARCL1Q14515 664 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 TCERG1LQ5VWI1 586 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 ARL6IP4Q66PJ3 421 aaKnown RBP6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 KRT73Q86Y46 540 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 CCDC150Q8NCX0 1101 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 TBC1D15Q8TC07 691 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 NUP133Q8WUM0 1156 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 C18orf8Q96DM3 657 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 SNX27Q96L92 541 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 LMF1Q96S06 567 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 MPHOSPH9Q99550 1183 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 CPPED1Q9BRF8 314 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 PAGR1Q9BTK6 254 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 MS4A7Q9GZW8 240 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 MAGEH1Q9H213 219 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 PRDM16Q9HAZ2 1276 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 OBP2BQ9NPH6 170 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 DACT1Q9NYF0 836 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 HESX1Q9UBX0 185 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 MID2Q9UJV3 735 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 CAPN11Q9UMQ6 739 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 AGAP1Q9UPQ3 857 aa6.3□□□□□ -1.4
HMGB1P46-201ENST00000520062 LOC102723971A0A1B0GUV8 181 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 FAM234BA2RU67 622 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 LGALS16A8MUM7 142 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 E9PLN8 166 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 RASSF9O75901 435 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 ACVR2AP27037 513 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 GABRB3P28472 473 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 SERPINF1P36955 418 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 KCNC1P48547 511 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 RAB30Q15771 203 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 SLC17A8Q8NDX2 589 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 OR52N2Q8NGI0 321 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 FAM71BQ8TC56 605 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 ST8SIA2Q92186 375 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 TBC1D20Q96BZ9 403 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 LRRC46Q96FV0 321 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 TBATAQ96M53 351 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 PPP1R9BQ96SB3 815 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 VKORC1Q9BQB6 163 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 PLA2G12BQ9BX93 195 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 CPEB1Q9BZB8 566 aaKnown RBP6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 IMPG2Q9BZV3 1241 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 HEYLQ9NQ87 328 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 SAGE1Q9NXZ1 904 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 RGL1Q9NZL6 768 aa6.29□□□□□ -1.4
HMGB1P46-201ENST00000520062 M0R3H8 397 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 ACKR2O00590 384 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 MFAP3LO75121 409 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 DHRS4L1P0CG22 281 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 CKBP12277 381 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 BTF3P20290 206 aaKnown RBP6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 GCSHP23434 173 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 SLC6A2P23975 617 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 PTTG1IPP53801 180 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 ARL4CP56559 192 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 PIGFQ07326 219 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 PRKG1Q13976 671 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 SLC29A2Q14542 456 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 GRM7Q14831 915 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 CSRP2Q16527 193 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 INSCQ1MX18 579 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 DCAF17Q5H9S7 520 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 SLFN13Q68D06 897 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 GGT6Q6P531 493 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms