RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 RNF40O75150 1001 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 VNN2O95498 520 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 OR52Z1P0C646 297 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 CSRP1P21291 193 aaKnown RBP12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 DRD1P21728 446 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 PROZP22891 400 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 NPTX2P47972 431 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 ORC2Q13416 577 aaPredicted RBP12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 RUNX3Q13761 415 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 MYBPC2Q14324 1141 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 NOLC1Q14978 699 aaKnown RBP eCLIP12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 TAF12Q16514 161 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 FBXO43Q4G163 708 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 OVOS1Q6IE37 1185 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 FSTL4Q6MZW2 842 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 ARMCX5Q6P1M9 558 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 DSTYKQ6XUX3 929 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 C11orf74Q86VG3 221 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 POLD4Q9HCU8 107 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 TMEM9BQ9NQ34 198 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 KMT5AQ9NQR1 393 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 ARHGAP28Q9P2N2 729 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 TUBGCP4Q9UGJ1 667 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 SLC27A5Q9Y2P5 690 aa12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 TIMM13Q9Y5L4 95 aaPredicted RBP12.73□□□□□ -0.37
TMEM55A-202ENST00000518359 LNP1A1A4G5 178 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 SOBPA7XYQ1 873 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 KHNYNO15037 678 aaKnown RBP12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 XPOTO43592 962 aaKnown RBP12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 CTDNEP1O95476 244 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 APBB3O95704 486 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 LRPAP1P30533 357 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 GBP1P32455 592 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 AVPR1AP37288 418 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 CCT6AP40227 531 aaKnown RBP12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 TUFMP49411 452 aaKnown RBP12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 CYP4F8P98187 520 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 STRN3Q13033 797 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 CC2D1AQ6P1N0 951 aaPredicted RBP12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 ZCCHC14Q8WYQ9 949 aaKnown RBP12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 ACDQ96AP0 544 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 DRC1Q96MC2 740 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 HHIPQ96QV1 700 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 FAM83CQ9BQN1 747 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 SCNM1Q9BWG6 230 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 C17orf75Q9HAS0 396 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 PLEKHA5Q9HAU0 1116 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 GKN1Q9NS71 199 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 ANKFY1Q9P2R3 1169 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 UBQLN1Q9UMX0 589 aaKnown RBP12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
TMEM55A-202ENST00000518359 SRRM3A6NNA2 597 aaPredicted RBP12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 ABLIM1O14639 778 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 DTNBO60941 627 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 TOM1L1O75674 476 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 FDPSP14324 419 aaKnown RBP12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 TYMPP19971 482 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 SPINK2P20155 84 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 CYP3A5P20815 502 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 BFSP1Q12934 665 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 SAFBQ15424 915 aaKnown RBP eCLIP12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 SLC10A6Q3KNW5 377 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 SYT13Q7L8C5 426 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 ATAD1Q8NBU5 361 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 CCDC26Q8TAB7 109 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 GATA6Q92908 595 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 KIF12Q96FN5 646 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 SEPT5Q99719 369 aaPredicted RBP12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 EBF3Q9H4W6 596 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 KIF9Q9HAQ2 790 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 EBF1Q9UH73 591 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 KCNG1Q9UIX4 513 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 KIAA1024Q9UPX6 916 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
TMEM55A-202ENST00000518359 DMXL2Q8TDJ6 3036 aa12.71□□□□□ -0.38
TMEM55A-202ENST00000518359 CLDN3O15551 220 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 HIP1RO75146 1068 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 SOAT2O75908 522 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 LARGE1O95461 756 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 EGFP01133 1207 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 CXCL8P10145 99 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 ODC1P11926 461 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 PAX3P23760 479 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 DDX6P26196 483 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 MATR3P43243 847 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 DGKEP52429 567 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 PPP2R3AQ06190 1150 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 MGAT5BQ3V5L5 792 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 USP39Q53GS9 565 aaKnown RBP12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 LRSAM1Q6UWE0 723 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 TAS1R3Q7RTX0 852 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 CYP2U1Q7Z449 544 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 CMTM8Q8IZV2 173 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 RPLP0P6Q8NHW5 317 aa12.7□□□□□ -0.38
TMEM55A-202ENST00000518359 P2RY13Q9BPV8 354 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms