RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TMTC4Q5T4D3 741 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 OLFML2BQ68BL8 750 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 SIGIRRQ6IA17 410 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 SNRNP48Q6IEG0 339 aaKnown RBP5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 NIPAL1Q6NVV3 410 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 RWDD4Q6NW29 188 aaKnown RBP5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 BORAQ6PGQ7 559 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 PRR23BQ6ZRT6 265 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 BEND5Q7L4P6 421 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC51BQ86UW2 128 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 CAND1Q86VP6 1230 aaKnown RBP5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 HID1Q8IV36 788 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 NELFCDQ8IXH7 590 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 CSGALNACT2Q8N6G5 542 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 FSIP1Q8NA03 581 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 MINDY2Q8NBR6 621 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 PYROXD1Q8WU10 500 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 AFG1LQ8WV93 481 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 RAPGEF5Q92565 580 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRIM63Q969Q1 353 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 ARL8AQ96BM9 186 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMA16Q96EY4 203 aaKnown RBP5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 GPATCH3Q96I76 525 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 KIRREL1Q96J84 757 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 CCDC43Q96MW1 224 aaKnown RBP5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 ASCC2Q9H1I8 757 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 Q9H521 79 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 CD209Q9NNX6 404 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 VTA1Q9NP79 307 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 INIPQ9NRY2 104 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 KBTBD4Q9NVX7 518 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 FANCLQ9NW38 375 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 KIAA1522Q9P206 1035 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 KLHL14Q9P2G3 628 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 MTRF1LQ9UGC7 380 aaKnown RBP5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC12A6Q9UHW9 1150 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 GGT7Q9UJ14 662 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 TNNQ9UQP3 1299 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 IFT52Q9Y366 437 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 PCDHB4Q9Y5E5 795 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 CD2APQ9Y5K6 639 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 CORINQ9Y5Q5 1042 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 ST14Q9Y5Y6 855 aa5.09□□□□□ -1.59
HMGB1P19-201ENST00000517578 CHD2O14647 1828 aaKnown RBP5.09□□□□□ -1.6
HMGB1P19-201ENST00000517578 HECW2Q9P2P5 1572 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 SYNJ2O15056 1496 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ASXL2Q76L83 1435 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 DISP3Q9P2K9 1392 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 GOLGA8QA0A0J9YX86 632 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCDC194A0A1B0GVG4 234 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CLRN2A0PK11 232 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 GRID2IPA4D2P6 1211 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 GOLGA8OA6NCC3 632 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCDC169A6NNP5 214 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 A8MXQ7 604 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ERVV-2B6SEH9 535 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 GOLGA8NF8WBI6 632 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 BOLA2-SMG1P6H3BVE0 249 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 GOLGA8RI6L899 631 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 M0QX08 132 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 TLR3O15455 904 aaKnown RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 YKT6O15498 198 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 KPNA6O60684 536 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 RAB11FIP3O75154 756 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ATP2C2O75185 946 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 FKBP9O95302 570 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 GNA14O95837 355 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 KRT1P04264 644 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 LYNP07948 512 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 PCP11498 1178 aaKnown RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 SLC16A2P36021 539 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CAP2P40123 477 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 RPL5P46777 297 aaKnown RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 RAP1GAPP47736 663 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ME1P48163 572 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 DSTNP60981 165 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 NCALDP61601 193 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 SLC34A1Q06495 639 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 MRPL28Q13084 256 aaKnown RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 PTK2BQ14289 1009 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ANO4Q32M45 955 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CFAP221Q4G0U5 840 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 SFRP5Q5T4F7 317 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 C6orf163Q5TEZ5 329 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDKAL1Q5VV42 579 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 LRRC8BQ6P9F7 803 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 C1orf228Q6PIY5 440 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCBE1Q6UXH8 406 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCDC81Q6ZN84 652 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ASRGL1Q7L266 308 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 HS2ST1Q7LGA3 356 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 HDGFL2Q7Z4V5 671 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ITIH5Q86UX2 942 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ERI1Q8IV48 349 aaKnown RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CNTROBQ8N137 903 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 THEMISQ8N1K5 641 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 MFSD4AQ8N468 514 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 TRIML2Q8N7C3 387 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 LINC00469Q8N7U9 141 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 TSPYL6Q8N831 410 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms