RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 SENP1Q9P0U3 644 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 SCOCQ9UIL1 159 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 TRPC5Q9UL62 973 aaPredicted RBP13.05□□□□□ -0.32
PCM1-203ENST00000517545 RPL26L1Q9UNX3 145 aaKnown RBP13.05□□□□□ -0.32
PCM1-203ENST00000517545 TROVE2P10155 538 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCM1-203ENST00000517545 ITGB5P18084 799 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 KCNA3P22001 575 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 SSTR1P30872 391 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 PSMC4P43686 418 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 TFDP1Q14186 410 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 LMBRD2Q68DH5 695 aaPredicted RBP13.05□□□□□ -0.32
PCM1-203ENST00000517545 TATDN1Q6P1N9 297 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 HHIPL2Q6UWX4 724 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 KATNAL2Q8IYT4 538 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 PSMG1O95456 288 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 IFNB1P01574 187 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 SERPINB2P05120 415 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 CACNA2D1P54289 1103 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 OCRLQ01968 901 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 SLC34A1Q06495 639 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 NFX1Q12986 1120 aaKnown RBP13.04□□□□□ -0.32
PCM1-203ENST00000517545 CCDC142Q17RM4 750 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 SPDYAQ5MJ70 313 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 MON1BQ7L1V2 547 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 OGFOD1Q8N543 542 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 TAB3Q8N5C8 712 aaPredicted RBP13.04□□□□□ -0.32
PCM1-203ENST00000517545 DDX50Q9BQ39 737 aaKnown RBP13.04□□□□□ -0.32
PCM1-203ENST00000517545 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 CLUHO75153 1309 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 ZNF831Q5JPB2 1677 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 ALOX15BO15296 676 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 VIL1P09327 827 aaKnown RBP13.04□□□□□ -0.32
PCM1-203ENST00000517545 RXRBP28702 533 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
PCM1-203ENST00000517545 RPS6KA3P51812 740 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCM1-203ENST00000517545 PTP4A2Q12974 167 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 SPP2Q13103 211 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 NLRX1Q86UT6 975 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 TMEM174Q8WUU8 243 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 MCUR1Q96AQ8 359 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
PCM1-203ENST00000517545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCM1-203ENST00000517545 TAS2R1Q9NYW7 299 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 SIPA1L1O43166 1804 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 SKIP12755 728 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 CPA2P48052 419 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 MAMLD1Q13495 774 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 ALCAMQ13740 583 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 SEPT7Q16181 437 aaKnown RBP13.04□□□□□ -0.32
PCM1-203ENST00000517545 MFSD7Q6UXD7 560 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 NSL1Q96IY1 281 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 FAM81BQ96LP2 452 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 TMEM121Q9BTD3 319 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 FOXP3Q9BZS1 431 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 KRT82Q9NSB4 513 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 ARMCX1Q9P291 453 aa13.04□□□□□ -0.32
PCM1-203ENST00000517545 RTN3O95197 1032 aaPredicted RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 ZWINTO95229 277 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 AMPD1P23109 780 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 STAT2P52630 851 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 WDR72Q3MJ13 1102 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 MSS51Q4VC12 460 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 RNASEH2BQ5TBB1 312 aaKnown RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 RABGEF1Q9UJ41 708 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 LGR5O75473 907 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 TJP3O95049 919 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 UBTFL6P0CB48 400 aaPredicted RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 GLRA2P23416 452 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 NEK3P51956 506 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 GEMIN4P57678 1058 aaKnown RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 ZBTB16Q05516 673 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 THOC5Q13769 683 aaKnown RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 NBPF20Q3BBV1 942 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 EFHC2Q5JST6 749 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 FAM102BQ5T8I3 360 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 PLA2G4FQ68DD2 849 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 MTHFD1LQ6UB35 978 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 TMEM120AQ9BXJ8 343 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 TRIM4Q9C037 500 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 MANSC1Q9H8J5 431 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 TLR3O15455 904 aaKnown RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 P4HBP07237 508 aaKnown RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 ARFIP2P53365 341 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 SOX10P56693 466 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 RPL7AP62424 266 aaKnown RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 UGCGQ16739 394 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 EAPPQ56P03 285 aaPredicted RBP13.03□□□□□ -0.32
PCM1-203ENST00000517545 TXNRD3NBQ6F5E7 133 aa13.03□□□□□ -0.32
PCM1-203ENST00000517545 SLC39A4Q6P5W5 647 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms