RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PKMYT1Q99640 499 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 LPIN3Q9BQK8 851 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 TTPALQ9BTX7 342 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 TTYH3Q9C0H2 523 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 PRDM12Q9H4Q4 367 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 RXFP1Q9HBX9 757 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 APEX2Q9UBZ4 518 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 FHOD1Q9Y613 1164 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 TMEM265A0A087WTH1 108 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 C2orf71A6NGG8 1288 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 TRAPPC3O43617 180 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 HUS1O60921 280 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 ATP2C2O75185 946 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 CALCAP01258 141 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 FAM163BP0C2L3 166 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 PNMA6AP0CW24 399 aaPredicted RBP10.58□□□□□ -0.72
CLN8-202ENST00000517514 ODC1P11926 461 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 RPL17P18621 184 aaKnown RBP10.58□□□□□ -0.72
CLN8-202ENST00000517514 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
CLN8-202ENST00000517514 GLUD2P49448 558 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 FXR1P51114 621 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLN8-202ENST00000517514 ZNF75DP51815 510 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 GCNT1Q02742 428 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 KRT17Q04695 432 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 ELAVL2Q12926 359 aaKnown RBP10.58□□□□□ -0.72
CLN8-202ENST00000517514 WDR44Q5JSH3 913 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 FKBP15Q5T1M5 1219 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 Q7L0L9 218 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 ADGRD2Q7Z7M1 963 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 LRRTM3Q86VH5 581 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 GPR65Q8IYL9 337 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 ADGRF2Q8IZF7 708 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 PPM1KQ8N3J5 372 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 APPL2Q8NEU8 664 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 RIN2Q8WYP3 895 aaPredicted RBP10.58□□□□□ -0.72
CLN8-202ENST00000517514 MMS19Q96T76 1030 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 CLSTN3Q9BQT9 956 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 ELOVL4Q9GZR5 314 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 DPEP3Q9H4B8 488 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 CYP3A43Q9HB55 503 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 UBE2TQ9NPD8 197 aaPredicted RBP10.58□□□□□ -0.72
CLN8-202ENST00000517514 TLR9Q9NR96 1032 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 TMLHEQ9NVH6 421 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 MTRRQ9UBK8 725 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 FBXL5Q9UKA1 691 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 DNAJC12Q9UKB3 198 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 CNTN6Q9UQ52 1028 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 IRAK3Q9Y616 596 aa10.58□□□□□ -0.72
CLN8-202ENST00000517514 GREB1Q4ZG55 1949 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 FOXN3O00409 490 aaPredicted RBP10.57□□□□□ -0.72
CLN8-202ENST00000517514 C2CD2LO14523 706 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CILPO75339 1184 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CSPG5O95196 566 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CXCL14O95715 111 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 TPM2P07951 284 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CNPP09543 421 aaKnown RBP10.57□□□□□ -0.72
CLN8-202ENST00000517514 OR4Q2P0C623 313 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 UCHL3P15374 230 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CD58P19256 250 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 ACAT1P24752 427 aaKnown RBP10.57□□□□□ -0.72
CLN8-202ENST00000517514 ZNF132P52740 706 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 NDST1P52848 882 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 RAD23BP54727 409 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 JAM2P57087 298 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 TNNC1P63316 161 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CETN1Q12798 172 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 ORC1Q13415 861 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 PSMD5Q16401 504 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 FILIP1LQ4L180 1135 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 PLPP4Q5VZY2 271 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 OVOS1Q6IE37 1185 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 VSTM4Q8IW00 320 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 TMEM86AQ8N2M4 240 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 MRPL43Q8N983 215 aaKnown RBP10.57□□□□□ -0.72
CLN8-202ENST00000517514 SHC3Q92529 594 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 BAP1Q92560 729 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 TCF25Q9BQ70 676 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 ZSWIM1Q9BR11 485 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 IMPG2Q9BZV3 1241 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 LMAN2LQ9H0V9 348 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CRTAC1Q9NQ79 661 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 CISHQ9NSE2 258 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 FAM207AQ9NSI2 230 aaPredicted RBP10.57□□□□□ -0.72
CLN8-202ENST00000517514 DDX43Q9NXZ2 648 aaKnown RBP10.57□□□□□ -0.72
CLN8-202ENST00000517514 STXBP5LQ9Y2K9 1186 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 BACE2Q9Y5Z0 518 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 PRUNE2Q8WUY3 3088 aa10.57□□□□□ -0.72
CLN8-202ENST00000517514 PRRC2BQ5JSZ5 2229 aaKnown RBP10.57□□□□□ -0.72
CLN8-202ENST00000517514 PATJQ8NI35 1801 aa10.56□□□□□ -0.72
CLN8-202ENST00000517514 MYBPHLA2RUH7 354 aa10.56□□□□□ -0.72
CLN8-202ENST00000517514 TEX28O15482 410 aa10.56□□□□□ -0.72
CLN8-202ENST00000517514 URODP06132 367 aa10.56□□□□□ -0.72
CLN8-202ENST00000517514 PDGFRBP09619 1106 aa10.56□□□□□ -0.72
CLN8-202ENST00000517514 POU3F3P20264 500 aaPredicted RBP10.56□□□□□ -0.72
CLN8-202ENST00000517514 TBXAS1P24557 533 aaPredicted RBP10.56□□□□□ -0.72
CLN8-202ENST00000517514 GNL1P36915 607 aaPredicted RBP10.56□□□□□ -0.72
CLN8-202ENST00000517514 CDR1P51861 262 aa10.56□□□□□ -0.72
CLN8-202ENST00000517514 POLR2FP61218 127 aaKnown RBP10.56□□□□□ -0.72
CLN8-202ENST00000517514 YWHAHQ04917 246 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms