RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 FGF19O95750 216 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 TYMPP19971 482 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 CNR2P34972 360 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 SLC12A3P55017 1021 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 MLLT6P55198 1093 aaPredicted RBP16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 MYBPC2Q14324 1141 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 VEPH1Q14D04 833 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 CSRP2Q16527 193 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 SLC39A12Q504Y0 691 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 JADE1Q6IE81 842 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 FAM160A2Q8N612 972 aaPredicted RBP16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 PSMG2Q969U7 264 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 CHAMP1Q96JM3 812 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 SENP8Q96LD8 212 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 MKNK1Q9BUB5 465 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 MSTO1Q9BUK6 570 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 ZHX3Q9H4I2 956 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 ASB3Q9Y575 518 aa16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.52■□□□□ 0.24
CSGALNACT1-204ENST00000517494 TPRP12270 2363 aaKnown RBP16.52■□□□□ 0.23
CSGALNACT1-204ENST00000517494 CITO14578 2027 aa16.52■□□□□ 0.23
CSGALNACT1-204ENST00000517494 FAM13AO94988 1023 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 PXNP49023 591 aaPredicted RBP16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 NCKAP1LP55160 1127 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 LILRA4P59901 499 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ZBTB6Q15916 424 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 CCDC6Q16204 474 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 KYAT1Q16773 422 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 AASDHQ4L235 1098 aaPredicted RBP16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 MYCT1Q8N699 235 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 OR10T2Q8NGX3 314 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 BPIFB1Q8TDL5 484 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 GIPC2Q8TF65 315 aa16.51■□□□□ 0.23
CSGALNACT1-204ENST00000517494 AXIN1O15169 862 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 OGTO15294 1046 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 KRT18P05783 430 aaKnown RBP16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 NFICP08651 508 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TMEM132DQ14C87 1099 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ST3GAL2Q16842 350 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ITPRIPL2Q3MIP1 535 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 HYIQ5T013 277 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 SPATA1Q5VX52 437 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 IL31Q6EBC2 164 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 GPBP1Q86WP2 473 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 C12orf50Q8NA57 414 aaPredicted RBP16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 REEP2Q9BRK0 252 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TASP1Q9H6P5 420 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 THG1LQ9NWX6 298 aaKnown RBP16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 KCND2Q9NZV8 630 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TBX20Q9UMR3 447 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ACACBO00763 2458 aa16.5■□□□□ 0.23
CSGALNACT1-204ENST00000517494 EXTL3O43909 919 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 PAPSS2O95340 614 aaPredicted RBP16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ATF6P18850 670 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 CDC25CP30307 473 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TUFMP49411 452 aaKnown RBP16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 MCM2P49736 904 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 PLCB2Q00722 1185 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 CCINQ13939 588 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TMEM119Q4V9L6 283 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 RILPL1Q5EBL4 403 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 C9orf57Q5W0N0 161 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 METTL23Q86XA0 190 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ARRDC1-AS1Q9H2J1 176 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 OBP2AQ9NY56 170 aa16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ABI2Q9NYB9 513 aaPredicted RBP16.49■□□□□ 0.23
CSGALNACT1-204ENST00000517494 FAM189A1O60320 539 aa16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 CCDC192P0DO97 292 aa16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 SF3A2Q15428 464 aaKnown RBP16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ARSHQ5FYA8 562 aa16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 WDR5BQ86VZ2 330 aa16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TTC16Q8NEE8 873 aa16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 PYM1Q9BRP8 204 aaKnown RBP16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ODF2LQ9ULJ1 636 aa16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
CSGALNACT1-204ENST00000517494 A0A0B4J269 797 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 H3BQV1 296 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 CYB561D2O14569 222 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 FOXD2O60548 495 aaPredicted RBP16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TBCAO75347 108 aaKnown RBP16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 RPP40O75818 363 aaKnown RBP16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 NMT1P30419 496 aaKnown RBP16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 AVPR1AP37288 418 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ACOT2P49753 483 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 GRSF1Q12849 480 aaKnown RBP eCLIP16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 BFSP1Q12934 665 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 PTPAQ15257 358 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TRIM68Q6AZZ1 485 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 PKN3Q6P5Z2 889 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 CD302Q8IX05 232 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 THEM5Q8N1Q8 247 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 SYNPOQ8N3V7 929 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 KCTD17Q8N5Z5 321 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 MAB21L3Q8N8X9 362 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 CALML4Q96GE6 196 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 TSPAN18Q96SJ8 248 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 SLC46A2Q9BY10 475 aa16.47■□□□□ 0.23
CSGALNACT1-204ENST00000517494 ZCWPW1Q9H0M4 648 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms