RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 BSPRYQ5W0U4 402 aa7□□□□□ -1.29
CPNE3-203ENST00000517490 SLC9A9Q8IVB4 645 aa7□□□□□ -1.29
CPNE3-203ENST00000517490 EPS8L1Q8TE68 723 aa7□□□□□ -1.29
CPNE3-203ENST00000517490 LRRC15Q8TF66 581 aa7□□□□□ -1.29
CPNE3-203ENST00000517490 FAM111AQ96PZ2 611 aa7□□□□□ -1.29
CPNE3-203ENST00000517490 MSTO1Q9BUK6 570 aa7□□□□□ -1.29
CPNE3-203ENST00000517490 EFHD1Q9BUP0 239 aa7□□□□□ -1.29
CPNE3-203ENST00000517490 FAM117AQ9C073 453 aa7□□□□□ -1.29
CPNE3-203ENST00000517490 BCL9LQ86UU0 1499 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CPA2P48052 419 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 GCLCP48506 637 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 EIF3EP60228 445 aaKnown RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 MDH1BQ5I0G3 518 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 RC3H1Q5TC82 1133 aaKnown RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 KRT80Q6KB66 452 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 TTC27Q6P3X3 843 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ZBTB8OSQ8IWT0 167 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 MCOLN2Q8IZK6 566 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 SUPT20HQ8NEM7 779 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 TMC2Q8TDI7 906 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 HSPH1Q92598 858 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 OPTNQ96CV9 577 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 KCNK16Q96T55 309 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CBWD1Q9BRT8 395 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 GCOM2Q9BZD3 368 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 VPS11Q9H270 941 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 SPATA31A6Q5VVP1 1343 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 DPPA5A6NC42 116 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 FAM196BA6NMK8 535 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 TGFB1I1O43294 461 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ATP5BP06576 529 aaKnown RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 PSAPP07602 524 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CCNB1P14635 433 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 MX2P20592 715 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 RPA3P35244 121 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 SERPINB9P50453 376 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CYLC2Q14093 348 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 PSMD6Q15008 389 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 TRIP10Q15642 601 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CYP1B1Q16678 543 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 POTEAQ6S8J7 498 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 TRABD2AQ86V40 505 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ASAP3Q8TDY4 903 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 NR1H4Q96RI1 486 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 FRMD8Q9BZ67 464 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 PRDM16Q9HAZ2 1276 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 PCDH9Q9HC56 1237 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 SIX2Q9NPC8 291 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ASNSD1Q9NWL6 643 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 KCPQ6ZWJ8 1503 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 WTIPA6NIX2 430 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 PRPF4O43172 522 aaKnown RBP eCLIP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 HSPA4LO95757 839 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 WEE2P0C1S8 567 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 AP1B1Q10567 949 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ART3Q13508 389 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 C1orf186Q6ZWK4 172 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ARID3BQ8IVW6 561 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CMTM5Q96DZ9 223 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 FAM163AQ96GL9 167 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 OXNAD1Q96HP4 312 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ZNF570Q96NI8 536 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CCDC28BQ9BUN5 200 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CYP4F11Q9HBI6 524 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 COG5Q9UP83 839 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CHMP2BQ9UQN3 213 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 RGPD2P0DJD1 1756 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 SCN11AQ9UI33 1791 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 IGSF9BQ9UPX0 1349 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 FCHO1O14526 889 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 TCEA3O75764 348 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 AP3M2P53677 418 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CNGA3Q16281 694 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 KCTD19Q17RG1 926 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 EPC2Q52LR7 807 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 FAM71AQ8IYT1 594 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 TTC8Q8TAM2 541 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ETNPPLQ8TBG4 499 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 TCP10LQ8TDR4 215 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 SLC7A3Q8WY07 619 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 CCDC124Q96CT7 223 aaKnown RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ANKRD36BP1Q96IX9 119 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 UNC45AQ9H3U1 944 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 METTL5Q9NRN9 209 aaKnown RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 NMRK1Q9NWW6 199 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 PRR12Q9ULL5 1215 aa6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ATF5Q9Y2D1 282 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-203ENST00000517490 ZMYM2Q9UBW7 1377 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 A6NJR5 290 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 FAM86B1E9PN63 330 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 K7ERI5 159 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 SLITRK3O94933 977 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 GH1P01241 217 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 FAM86B2P0C5J1 330 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 OSBPP22059 807 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 NFIXQ14938 502 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 SLC15A2Q16348 729 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 LRRC36Q1X8D7 754 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 TLDC1Q6P9B6 456 aa6.98□□□□□ -1.29
CPNE3-203ENST00000517490 HHIPL2Q6UWX4 724 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms