RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 E2F7Q96AV8 911 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 SPATA33Q96N06 139 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 FAM49AQ9H0Q0 323 aaPredicted RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 GBP3Q9H0R5 595 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 LRTM1Q9HBL6 345 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 AVENQ9NQS1 362 aaPredicted RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 RAI14Q9P0K7 980 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 CROTQ9UKG9 612 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 MMP17Q9ULZ9 603 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 NOP58Q9Y2X3 529 aaKnown RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 FHOD1Q9Y613 1164 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 TENM2Q9NT68 2774 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 PTPRCP08575 1304 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 KDM3AQ9Y4C1 1321 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 TMEM131Q92545 1883 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 ANTXRLA6NF34 631 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 ELL2O00472 640 aaPredicted RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 IPO8O15397 1037 aaKnown RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 CTIFO43310 598 aaKnown RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 PPP6R2O75170 966 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 NDUFS2O75306 463 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 RPS6KA5O75582 802 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 DNAJB5O75953 348 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 CNTN5O94779 1100 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 C7P10643 843 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 AKR1B1P15121 316 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 ACP1P24666 158 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 CALML3P27482 149 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 CSNK1EP49674 416 aaKnown RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 SEC13P55735 322 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 DSG1Q02413 1049 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 RAD51AP2Q09MP3 1159 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 FLIIQ13045 1269 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 SHBQ15464 509 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 NADK2Q4G0N4 442 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 UBAP2Q5T6F2 1119 aaKnown RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 TCTN3Q6NUS6 607 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 ZNF517Q6ZMY9 492 aaPredicted RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 FAM43BQ6ZT52 329 aaPredicted RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 ADGRA1Q86SQ6 560 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 KLHDC4Q8TBB5 520 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 DNASE2BQ8WZ79 361 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 FOXJ1Q92949 421 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 IGSF8Q969P0 613 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 ZMYND19Q96E35 227 aaPredicted RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 ATXN7L3BQ96GX2 97 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 FEM1CQ96JP0 617 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 COX4I2Q96KJ9 171 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 B3GALT6Q96L58 329 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 CATSPER2Q96P56 530 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 ALPK1Q96QP1 1244 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 RANBP9Q96S59 729 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 CELF4Q9BZC1 486 aaKnown RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 AMBRA1Q9C0C7 1298 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 ST3GAL5Q9UNP4 418 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 HDAC5Q9UQL6 1122 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 NOC2LQ9Y3T9 749 aaKnown RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 SALL2Q9Y467 1007 aaPredicted RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 PCDHA5Q9Y5H7 936 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 KAT6AQ92794 2004 aa3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 DIDO1Q9BTC0 2240 aaKnown RBP3.66□□□□□ -1.82
SCARNA13-201ENST00000516672 MUC2Q02817 5179 aa3.65□□□□□ -1.82
SCARNA13-201ENST00000516672 TCRBV21S2A2A0A5A6 115 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 C19orf84I3L1E1 186 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 LAD1O00515 517 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 OPA1O60313 960 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ALDH1L1O75891 902 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 NDUFB10O96000 172 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ITGAVP06756 1048 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ITGA2BP08514 1039 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 TRIM27P14373 513 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 SMARCA1P28370 1054 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 CCR2P41597 374 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 MLLT3P42568 568 aaPredicted RBP3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 DGKQP52824 942 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 RARSP54136 660 aaKnown RBP3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 DYNLL1P63167 89 aaKnown RBP3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 SRSF2Q01130 221 aaKnown RBP3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 CBLBQ13191 982 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 SEPT6Q14141 434 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ARID5BQ14865 1188 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ATP2B3Q16720 1220 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 INF2Q27J81 1249 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ISXQ2M1V0 245 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 SYDE2Q5VT97 1194 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 MYSM1Q5VVJ2 828 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 B4GALNT3Q6L9W6 998 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 SLC30A10Q6XR72 485 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ECHDC2Q86YB7 292 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 JAMLQ86YT9 394 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 CCDC13Q8IYE1 715 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 CIARTQ8N365 385 aaPredicted RBP3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.65□□□□□ -1.835e-28■■■□□ 19.2
SCARNA13-201ENST00000516672 RDH13Q8NBN7 331 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 TBC1D32Q96NH3 1257 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 LRRC3BQ96PB8 259 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 SECISBP2Q96T21 854 aaKnown RBP3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 API5Q9BZZ5 524 aaKnown RBP3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 TBC1D13Q9NVG8 400 aa3.65□□□□□ -1.83
SCARNA13-201ENST00000516672 FNIP2Q9P278 1114 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms