RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 ITGALP20701 1170 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 MALP21145 153 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 EDNRBP24530 442 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SMARCA1P28370 1054 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ADKP55263 362 aaKnown RBP3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SRSF7Q16629 238 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ABCB5Q2M3G0 1257 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 EFCAB2Q5VUJ9 269 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 RASAL3Q86YV0 1011 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ATRIPQ8WXE1 791 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 DPF1Q92782 380 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 KAT5Q92993 513 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FKBP10Q96AY3 582 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 LRIG1Q96JA1 1093 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 VKORC1Q9BQB6 163 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TPSD1Q9BZJ3 242 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 GPR35Q9HC97 309 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TRHDEQ9UKU6 1024 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ST3GAL5Q9UNP4 418 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 POLHQ9Y253 713 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCDHB1Q9Y5F3 818 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCDHGA12O60330 932 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 DTNBO60941 627 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 GJB1P08034 283 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 EBLN1P0CF75 366 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NR2F6P10588 404 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 RARBP10826 455 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZFXP17010 805 aaPredicted RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 DRD4P21917 467 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CCT8P50990 548 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FXR1P51114 621 aaKnown RBP eCLIP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 GUCY2FP51841 1108 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 HNRNPMP52272 730 aaKnown RBP eCLIP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PSMC1P62191 440 aaKnown RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 GRM1Q13255 1194 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 BMPR2Q13873 1038 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 UAP1L1Q3KQV9 507 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 KHDC1Q4VXA5 237 aaKnown RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 RNF187Q5TA31 235 aaPredicted RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 THEMIS2Q5TEJ8 643 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF551Q7Z340 670 aaPredicted RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF804AQ7Z570 1209 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PNMA8AQ86V59 439 aaPredicted RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CAMKK1Q8N5S9 505 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PSD4Q8NDX1 1056 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SEMA6DQ8NFY4 1073 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 DDX17Q92841 729 aaKnown RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 RFKQ969G6 155 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 DMRTA2Q96SC8 542 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 VRK1Q99986 396 aaPredicted RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ACTRT3Q9BYD9 372 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SEMA4CQ9C0C4 833 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ETAA1Q9NY74 926 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCDHGA9Q9Y5G4 932 aaKnown RBP3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCDHGA8Q9Y5G5 932 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCDHGA7Q9Y5G6 932 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCDHGA6Q9Y5G7 932 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCDHGA3Q9Y5H0 932 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 AOX1Q06278 1338 aa3.38□□□□□ -1.87
SCARNA16.2-201ENST00000516520 VWC2LB2RUY7 222 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NT5C1B-RDH14C9J2C7 533 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FZD9O00144 591 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SLC16A6O15403 523 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 GNAI2P04899 355 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 RHOP08100 348 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NDUFB7P17568 137 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 LPOP22079 712 aaPredicted RBP3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CD6P30203 668 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PIK3CGP48736 1102 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF135P52742 658 aaPredicted RBP3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ITKQ08881 620 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TCF15Q12870 199 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SNAPC2Q13487 334 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 HABP2Q14520 560 aaPredicted RBP3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TAF2Q6P1X5 1199 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CEP85Q6P2H3 762 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SLC30A10Q6XR72 485 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 MIER2Q8N344 545 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 C3orf20Q8ND61 904 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 DDB2Q92466 427 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FAM136AQ96C01 138 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 MTMR8Q96EF0 704 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF778Q96MU6 729 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PUS7Q96PZ0 661 aaKnown RBP3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SLC13A1Q9BZW2 595 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 AMBRA1Q9C0C7 1298 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 WDCPQ9H6R7 721 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FEZ2Q9UHY8 353 aaPredicted RBP3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ADAM21Q9UKJ8 722 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZDHHC8Q9ULC8 765 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF804BA4D1E1 1349 aa3.37□□□□□ -1.87
SCARNA16.2-201ENST00000516520 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 WDR91A4D1P6 747 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ALG1L2C9J202 215 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PROB1E7EW31 1015 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 GABRDO14764 452 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 HNRNPCP07910 306 aaKnown RBP eCLIP3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CDK11BP21127 795 aaKnown RBP3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CERS1P27544 350 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PRDX5P30044 214 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms