RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 CFAP52Q8N1V2 620 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 NINJ1Q92982 152 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 C5orf34Q96MH7 638 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 TRIB1Q96RU8 372 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 OSBPL9Q96SU4 736 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 FAM118BQ9BPY3 351 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 TLR10Q9BXR5 811 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 ACTRT3Q9BYD9 372 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 IMPG2Q9BZV3 1241 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 QRSL1Q9H0R6 528 aaKnown RBP2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 OSBPL2Q9H1P3 480 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 TOPORSQ9NS56 1045 aaPredicted RBP2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 POT1Q9NUX5 634 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 CTTNBP2NLQ9P2B4 639 aa2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 CDK11AQ9UQ88 783 aaPredicted RBP2.18□□□□□ -2.06
RNU6-561P-201ENST00000516222 CD8B2A6NJW9 211 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 CYSRT1A8MQ03 144 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 VWC2LB2RUY7 222 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 UBE2Q2LH0YL09 131 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 DSCR3O14972 297 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 ZEB2O60315 1214 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 ALPLP05186 524 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 KRT10P13645 584 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 ITGALP20701 1170 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 IL1R2P27930 398 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 NDUFV1P49821 464 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 HNRNPMP52272 730 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 CTXN1P60606 82 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 TBC1D25Q3MII6 688 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 ZNF618Q5T7W0 954 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 Q6ZTC4 211 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 USP43Q70EL4 1123 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 IRF2BP2Q7Z5L9 587 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 NPM2Q86SE8 214 aaKnown RBP2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 PIM3Q86V86 326 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 SLC17A8Q8NDX2 589 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 NSUN7Q8NE18 718 aaKnown RBP2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 IL17RDQ8NFM7 739 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 C16orf52Q8NHV5 167 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 TSPEARQ8WU66 669 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 LEO1Q8WVC0 666 aaPredicted RBP2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 SSH1Q8WYL5 1049 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 TTC1Q99614 292 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 SIK2Q9H0K1 926 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 HIPK2Q9H2X6 1198 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 JKAMPQ9P055 326 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 SAP30BPQ9UHR5 308 aaKnown RBP2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 SCOCQ9UIL1 159 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 ICKQ9UPZ9 632 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 DNM3Q9UQ16 869 aa2.17□□□□□ -2.06
RNU6-561P-201ENST00000516222 E9PSI1 815 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 H3BNX3 289 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 POLRMTO00411 1230 aaKnown RBP2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 WNT10BO00744 389 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 NEMP1O14524 444 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 GRM6O15303 877 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 TLR5O60602 858 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 USP1O94782 785 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 RHOP08100 348 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 CYP2C18P33260 490 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 THBS3P49746 956 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 PPP3CAQ08209 521 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 ERV3-1Q14264 604 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 BMS1Q14692 1282 aaKnown RBP2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 C21orf62-AS1Q17RA5 79 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 TAPT1Q6NXT6 567 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 C16orf86Q6ZW13 317 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 FOXP4Q8IVH2 680 aaPredicted RBP2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 ADHFE1Q8IWW8 467 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 RHOT1Q8IXI2 618 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 KRT78Q8N1N4 520 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 C8orf58Q8NAV2 365 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 HOXB13Q92826 284 aaPredicted RBP2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 FAM136AQ96C01 138 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 REPS1Q96D71 796 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 DAZAP1Q96EP5 407 aaKnown RBP2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 C8orf37Q96NL8 207 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 AMBRA1Q9C0C7 1298 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 IFT22Q9H7X7 185 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 DMRT3Q9NQL9 472 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 MAN1C1Q9NR34 630 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 TDP1Q9NUW8 608 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 TFCP2L1Q9NZI6 479 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 PROCRQ9UNN8 238 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 PLAAQ9Y263 795 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 CCDC9Q9Y3X0 531 aaKnown RBP2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 PCDHGA2Q9Y5H1 932 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 CD2APQ9Y5K6 639 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 SQORQ9Y6N5 450 aa2.16□□□□□ -2.06
RNU6-561P-201ENST00000516222 E5RJQ4 531 aa2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 POC1B-GALNT4F8VUJ3 575 aa2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 SLC43A1O75387 559 aa2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 CRYABP02511 175 aaKnown RBP2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 AMY1AP04745 511 aa2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 RPLP2P05387 115 aaKnown RBP2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 CHRM5P08912 532 aaPredicted RBP2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 NPSP0C0P6 89 aa2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 SFPQP23246 707 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU6-561P-201ENST00000516222 CD6P30203 668 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms