RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 GDAP2Q9NXN4 497 aa8.13□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CTTNBP2NLQ9P2B4 639 aa8.13□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CNOT8Q9UFF9 292 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GTF3C4Q9UKN8 822 aa8.13□□□□□ -1.11
SCARNA20.1-201ENST00000516009 KIAA1257Q9ULG3 409 aa8.13□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MRFAP1Q9Y605 127 aa8.13□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SAR1BQ9Y6B6 198 aa8.13□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TET1Q8NFU7 2136 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 UQCRHLA0A096LP55 91 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C9IYK1 514 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SPTLC1O15269 473 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 HUS1O60921 280 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MTA2O94776 668 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PARNO95453 639 aaKnown RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 POMCP01189 267 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CYP1A2P05177 515 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 UQCRHP07919 91 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CFHP08603 1231 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PRLRP16471 622 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TCP1P17987 556 aaKnown RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SSTR3P32745 418 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CDH5P33151 784 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CTCFP49711 727 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MNX1P50219 401 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LBX1P52954 281 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LILRA4P59901 499 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 AMPD2Q01433 879 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TLE2Q04725 743 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GRIK3Q13003 919 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ORC1Q13415 861 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 STILQ15468 1287 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 WHAMMP3Q1A5X7 153 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SGO2Q562F6 1265 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PLEKHG4Q58EX7 1191 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LIN9Q5TKA1 542 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GLB1LQ6UWU2 654 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DPH6Q7L8W6 267 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SLFN11Q7Z7L1 901 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DAAM2Q86T65 1068 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ZNF598Q86UK7 904 aaKnown RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 UNC93AQ86WB7 457 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PHF13Q86YI8 300 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MCOLN2Q8IZK6 566 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TOP6BLQ8N6T0 577 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MNS1Q8NEH6 495 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 APPL2Q8NEU8 664 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 OR6B3Q8NGW1 331 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CPA5Q8WXQ8 436 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TFAP2BQ92481 460 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 APBB2Q92870 758 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 HEXIM2Q96MH2 286 aaKnown RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TOX2Q96NM4 488 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ZSWIM1Q9BR11 485 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MRPL45Q9BRJ2 306 aaKnown RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CARD6Q9BX69 1037 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LHX5Q9H2C1 402 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SNX25Q9H3E2 840 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 HIPK3Q9H422 1215 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 OSGEPQ9NPF4 335 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MIOSQ9NXC5 875 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ADAM22Q9P0K1 906 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 UVRAGQ9P2Y5 699 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 HMGXB4Q9UGU5 601 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SNX12Q9UMY4 172 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 INPP5FQ9Y2H2 1132 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 HYOU1Q9Y4L1 999 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CEP350Q5VT06 3117 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 BRCA2P51587 3418 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MICAL3Q7RTP6 2002 aa8.12□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TSC2P49815 1807 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CASTOR2A6NHX0 329 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 A8MXQ7 604 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 O00370 1275 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PODXLO00592 558 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CYB561D2O14569 222 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 INPPL1O15357 1258 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ATMINO43313 823 aaPredicted RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 BUB1BO60566 1050 aaPredicted RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 NBNO60934 754 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 FTCDO95954 541 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CALB1P05937 261 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 COL6A1P12109 1028 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MMP8P22894 467 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PAX3P23760 479 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GJA8P48165 433 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CLCNKBP51801 687 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 AFF1P51825 1210 aaKnown RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 FAM189BP81408 668 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C1QBPQ07021 282 aaKnown RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TUSC3Q13454 348 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 RPS6KA1Q15418 735 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CNGA2Q16280 664 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SOWAHAQ2M3V2 549 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TRIM60Q495X7 471 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MEI1Q5TIA1 1274 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C1orf53Q5VUE5 145 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DENND1BQ6P3S1 775 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MMS22LQ6ZRQ5 1243 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms