RNA–Protein interactions for RNA: ENST00000515737.5

SH3BP2-228, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-228ENST00000515737 ARHGEF6Q15052 776 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 C9orf57Q5W0N0 161 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 OSBPL7Q9BZF2 842 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 HMX1Q9NP08 348 aaPredicted RBP17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 RBM12Q9NTZ6 932 aaKnown RBP17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 MMGT1Q8N4V1 131 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 WDTC1Q8N5D0 677 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 LRRC52Q8N7C0 313 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 SLAIN1Q8ND83 568 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 TRIM7Q9C029 511 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 ZNF518BQ9C0D4 1074 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 CEP83Q9Y592 693 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 GPR182O15218 404 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 MED7O43513 233 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 CD4P01730 458 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 GRK4P32298 578 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 NDST1P52848 882 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 INCA1Q0VD86 236 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 LHX8Q68G74 356 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 USP38Q8NB14 1042 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 ACTRT1Q8TDG2 376 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 CHST12Q9NRB3 414 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 FAM105AQ9NUU6 356 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 XPOTO43592 962 aaKnown RBP17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 SPOPO43791 374 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 DENND1BQ6P3S1 775 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 CPNE8Q86YQ8 564 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 ALG3Q92685 438 aa17.95■□□□□ 0.46
SH3BP2-228ENST00000515737 MEIS3P2A8K0S8 358 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 MYO1FO00160 1098 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 GHRP10912 638 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 CDH5P33151 784 aaPredicted RBP17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 PTK7Q13308 1070 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 MAMLD1Q13495 774 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 DCAF12L1Q5VU92 463 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 MTERF4Q7Z6M4 381 aaKnown RBP17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 TTC39CQ8N584 583 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 KRT35Q92764 455 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 HEXIM2Q96MH2 286 aaKnown RBP17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 ZFP42Q96MM3 310 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 TSPAN18Q96SJ8 248 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.465e-10■■■□□ 15.1
SH3BP2-228ENST00000515737 CARD9Q9H257 536 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 GOLGA2P5Q9HBQ8 144 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 MRPL47Q9HD33 250 aaKnown RBP17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 RAB21Q9UL25 225 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 PADI3Q9ULW8 664 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 PGRMC1O00264 195 aaKnown RBP17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 ATF7P17544 494 aaPredicted RBP17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 CD52P31358 61 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 SOX4Q06945 474 aaPredicted RBP17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 FBXO47Q5MNV8 452 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 PLEKHA7Q6IQ23 1121 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 RASGEF1CQ8N431 466 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 UBL4BQ8N7F7 174 aa17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 FAM124BQ9H5Z6 455 aaPredicted RBP17.94■□□□□ 0.46
SH3BP2-228ENST00000515737 PIRO00625 290 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 MARCKSL1P49006 195 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 ERICH1Q86X53 443 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 CD101Q93033 1021 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 LRRC1Q9BTT6 524 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 NT5C1AQ9BXI3 368 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 WNT8AQ9H1J5 351 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 LHX5Q9H2C1 402 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 PTGESO14684 152 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 CALB1P05937 261 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 VDRP11473 427 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 VSNL1P62760 191 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 MRPS25P82663 173 aaKnown RBP17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 CCDC70Q6NSX1 233 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 MRPL45Q9BRJ2 306 aaKnown RBP17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 PARVAQ9NVD7 372 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 SCINQ9Y6U3 715 aa17.93■□□□□ 0.46
SH3BP2-228ENST00000515737 ITGA4P13612 1032 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 UBE2Q2Q8WVN8 375 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 TSEN34Q9BSV6 310 aaKnown RBP17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 ERVK-5Q9HDB9 667 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 TRIM17Q9Y577 477 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 PTCH2Q9Y6C5 1203 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 CCDC151A5D8V7 595 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 GJB6O95452 261 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 TUBBP07437 444 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 CYP3A5P20815 502 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 PEX5P50542 639 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 PRMT2P55345 433 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 PAK2Q13177 524 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 BRD3Q15059 726 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 TRIM71Q2Q1W2 868 aaKnown RBP17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 SGO2Q562F6 1265 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 TMCO3Q6UWJ1 677 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 HACE1Q8IYU2 909 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 LPPQ93052 612 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 RNPC3Q96LT9 517 aaKnown RBP17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 TMEM59LQ9UK28 342 aa17.92■□□□□ 0.46
SH3BP2-228ENST00000515737 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms