RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CASP10Q92851 521 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 TUBGCP2Q9BSJ2 902 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 FANCLQ9NW38 375 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 CLDND1Q9NY35 253 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 NXF1Q9UBU9 619 aaKnown RBP12.76□□□□□ -0.37
SNF8-215ENST00000515572 MAFFQ9ULX9 164 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 L1RE1Q9UN81 338 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 COG5Q9UP83 839 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 HCFC2Q9Y5Z7 792 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 GABRDO14764 452 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 GLP2RO95838 553 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 PCSK1P29120 753 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 GTF2F1P35269 517 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNF8-215ENST00000515572 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
SNF8-215ENST00000515572 SMARCB1Q12824 385 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 TPGS2Q68CL5 300 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 LILRA6Q6PI73 481 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
SNF8-215ENST00000515572 RTL10Q7L3V2 364 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 PALB2Q86YC2 1186 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 AOPEPQ8N6M6 819 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 ANKRD20A12PQ8NF67 263 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 HLA-CQ95604 372 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 ACBD6Q9BR61 282 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 NIF3L1Q9GZT8 377 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 SNX25Q9H3E2 840 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 PLEKHA4Q9H4M7 779 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 FAM124BQ9H5Z6 455 aaPredicted RBP12.75□□□□□ -0.37
SNF8-215ENST00000515572 DZANK1Q9NVP4 752 aa12.75□□□□□ -0.37
SNF8-215ENST00000515572 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
SNF8-215ENST00000515572 GTPBP10A4D1E9 387 aaKnown RBP12.74□□□□□ -0.37
SNF8-215ENST00000515572 LINC01565O15544 149 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 ADAM12O43184 909 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 TGM5O43548 720 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 ABLIM3O94929 683 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 TPM2P07951 284 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 CPB1P15086 417 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 ATF2P15336 505 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
SNF8-215ENST00000515572 WARSP23381 471 aaKnown RBP12.74□□□□□ -0.37
SNF8-215ENST00000515572 TSPY1Q01534 308 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 ROR1Q01973 937 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 GPR17Q13304 367 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 NCAPHQ15003 741 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 VWA3BQ502W6 1294 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 HSP90AA4PQ58FG1 418 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 GLYCTKQ8IVS8 523 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
SNF8-215ENST00000515572 TTC39CQ8N584 583 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 KBTBD7Q8WVZ9 684 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 SEMA4DQ92854 862 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 RTP3Q9BQQ7 232 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 PI4K2AQ9BTU6 479 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 BCO2Q9BYV7 579 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 DNAI2Q9GZS0 605 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 ZCWPW1Q9H0M4 648 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 UBE2ZQ9H832 354 aaPredicted RBP12.74□□□□□ -0.37
SNF8-215ENST00000515572 CYP3A43Q9HB55 503 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 DDX43Q9NXZ2 648 aaKnown RBP12.74□□□□□ -0.37
SNF8-215ENST00000515572 AFF4Q9UHB7 1163 aaKnown RBP12.74□□□□□ -0.37
SNF8-215ENST00000515572 POLIQ9UNA4 740 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 CDH23Q9H251 3354 aa12.74□□□□□ -0.37
SNF8-215ENST00000515572 WDR27A2RRH5 827 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 BECN2A8MW95 431 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 EPCAMP16422 314 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 ZNF18P17022 549 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 TRIM21P19474 475 aaKnown RBP12.73□□□□□ -0.37
SNF8-215ENST00000515572 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
SNF8-215ENST00000515572 LTBRP36941 435 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 ASPAP45381 313 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 ARPP19P56211 112 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 TPM4P67936 248 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 MAPRE1Q15691 268 aaKnown RBP12.73□□□□□ -0.37
SNF8-215ENST00000515572 LIN9Q5TKA1 542 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 SPOPLQ6IQ16 392 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 ANKRD54Q6NXT1 300 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 GBP6Q6ZN66 633 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 CCDC149Q6ZUS6 474 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 DHX40Q8IX18 779 aaKnown RBP12.73□□□□□ -0.37
SNF8-215ENST00000515572 KREMEN2Q8NCW0 462 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 VN1R2Q8NFZ6 395 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 OR6B3Q8NGW1 331 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 OR10T2Q8NGX3 314 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 C2orf15Q8WU43 125 aaKnown RBP12.73□□□□□ -0.37
SNF8-215ENST00000515572 NDST4Q9H3R1 872 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 SFXN1Q9H9B4 322 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 APOBEC3GQ9HC16 384 aaKnown RBP12.73□□□□□ -0.37
SNF8-215ENST00000515572 MAN1C1Q9NR34 630 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 HSFX1Q9UBD0 423 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 CDH9Q9ULB4 789 aa12.73□□□□□ -0.37
SNF8-215ENST00000515572 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 TBX10O75333 385 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
SNF8-215ENST00000515572 TBXAS1P24557 533 aaPredicted RBP12.72□□□□□ -0.37
SNF8-215ENST00000515572 HOXA9P31269 272 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 ELF1P32519 619 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms