RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 TMEM8AQ9HCN3 771 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 CCDC195A0A1B0GUA6 201 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 ZMYND10O75800 440 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 STAU1O95793 577 aaKnown RBP27.86■■■□□ 2.05
DDR1-279ENST00000515529 C8AP07357 584 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 MYL7Q01449 175 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 TSPY1Q01534 308 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 TPD52L1Q16890 204 aaPredicted RBP27.86■■■□□ 2.05
DDR1-279ENST00000515529 C1orf220Q5T0J3 134 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 CCDC150Q8NCX0 1101 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 CMASQ8NFW8 434 aaPredicted RBP27.86■■■□□ 2.05
DDR1-279ENST00000515529 SLC7A14Q8TBB6 771 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 NECTIN4Q96NY8 510 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 PIDD1Q9HB75 910 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 NXF1Q9UBU9 619 aaKnown RBP27.86■■■□□ 2.05
DDR1-279ENST00000515529 AFF4Q9UHB7 1163 aaKnown RBP27.86■■■□□ 2.05
DDR1-279ENST00000515529 MAFFQ9ULX9 164 aa27.86■■■□□ 2.05
DDR1-279ENST00000515529 RFPL2O75678 378 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 ABLIM3O94929 683 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 GNA14O95837 355 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 OR4Q2P0C623 313 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 P4HA1P13674 534 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 ATF2P15336 505 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 PTMSP20962 102 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 LHX1P48742 406 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 CBX2Q14781 532 aaPredicted RBP27.85■■■□□ 2.05
DDR1-279ENST00000515529 SGSM1Q2NKQ1 1148 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 UVSSAQ2YD98 709 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 ZNF667Q5HYK9 610 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 KRT39Q6A163 491 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 C15orf39Q6ZRI6 1047 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 FRMD5Q7Z6J6 570 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 ADAMTS19Q8TE59 1207 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 SRRTQ9BXP5 876 aaKnown RBP27.85■■■□□ 2.05
DDR1-279ENST00000515529 CYP4F11Q9HBI6 524 aa27.85■■■□□ 2.05
DDR1-279ENST00000515529 HLA-DRAP01903 254 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 HNRNPA1P09651 372 aaKnown RBP eCLIP27.84■■■□□ 2.05
DDR1-279ENST00000515529 MXI1P50539 228 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 PPP3CAQ08209 521 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 ADCY1Q08828 1119 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 SOWAHAQ2M3V2 549 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 DPCR1Q3MIW9 517 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 SASS6Q6UVJ0 657 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 CYP26C1Q6V0L0 522 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 RTL10Q7L3V2 364 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 GPR149Q86SP6 731 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 DCP1BQ8IZD4 617 aaKnown RBP27.84■■■□□ 2.05
DDR1-279ENST00000515529 OR10T2Q8NGX3 314 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 SUSD6Q92537 303 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 SMG7Q92540 1137 aaKnown RBP27.84■■■□□ 2.05
DDR1-279ENST00000515529 TAF4BQ92750 862 aa27.84■■■□□ 2.05
DDR1-279ENST00000515529 DDX43Q9NXZ2 648 aaKnown RBP27.84■■■□□ 2.05
DDR1-279ENST00000515529 XYLBO75191 536 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 VNN1O95497 513 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 WEE2P0C1S8 567 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 PCSK1P29120 753 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 GPR17Q13304 367 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 RNF19BQ6ZMZ0 732 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 PGLYRP2Q96PD5 576 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 PRKD2Q9BZL6 878 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 XYLT2Q9H1B5 865 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 SNX25Q9H3E2 840 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 VRTNQ9H8Y1 702 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 TSC2P49815 1807 aa27.83■■■□□ 2.05
DDR1-279ENST00000515529 LRG1P02750 347 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 HOXA9P31269 272 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 SLC39A12Q504Y0 691 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 TCEAL8Q8IYN2 117 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 TMEM209Q96SK2 561 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 ACBD6Q9BR61 282 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 ZCWPW1Q9H0M4 648 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 PRKAG3Q9UGI9 489 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 POLIQ9UNA4 740 aa27.82■■■□□ 2.04
DDR1-279ENST00000515529 CCDC192P0DO97 292 aa27.81■■■□□ 2.04
DDR1-279ENST00000515529 MCCD1P59942 119 aaPredicted RBP27.81■■■□□ 2.04
DDR1-279ENST00000515529 SMARCB1Q12824 385 aa27.81■■■□□ 2.04
DDR1-279ENST00000515529 RBM43Q6ZSC3 357 aaKnown RBP27.81■■■□□ 2.04
DDR1-279ENST00000515529 TAS1R2Q8TE23 839 aa27.81■■■□□ 2.04
DDR1-279ENST00000515529 UHRF1Q96T88 793 aaPredicted RBP27.81■■■□□ 2.04
DDR1-279ENST00000515529 RTP3Q9BQQ7 232 aa27.81■■■□□ 2.04
DDR1-279ENST00000515529 MTCL1Q9Y4B5 1905 aaKnown RBP27.8■■■□□ 2.04
DDR1-279ENST00000515529 CCL16O15467 120 aa27.8■■■□□ 2.04
DDR1-279ENST00000515529 FAM163BP0C2L3 166 aa27.8■■■□□ 2.04
DDR1-279ENST00000515529 WARSP23381 471 aaKnown RBP27.8■■■□□ 2.04
DDR1-279ENST00000515529 ERCC5P28715 1186 aaPredicted RBP27.8■■■□□ 2.04
DDR1-279ENST00000515529 CT47A1Q5JQC4 288 aaPredicted RBP27.8■■■□□ 2.04
DDR1-279ENST00000515529 SCARA5Q6ZMJ2 495 aa27.8■■■□□ 2.04
DDR1-279ENST00000515529 CREBRFQ8IUR6 639 aa27.8■■■□□ 2.04
DDR1-279ENST00000515529 FBXL13Q8NEE6 735 aa27.8■■■□□ 2.04
DDR1-279ENST00000515529 OR6B3Q8NGW1 331 aa27.8■■■□□ 2.04
DDR1-279ENST00000515529 PHF7Q9BWX1 381 aaPredicted RBP27.8■■■□□ 2.04
DDR1-279ENST00000515529 CDH22Q9UJ99 828 aa27.8■■■□□ 2.04
DDR1-279ENST00000515529 INSL5Q9Y5Q6 135 aa27.8■■■□□ 2.04
DDR1-279ENST00000515529 TACC1O75410 805 aa27.79■■■□□ 2.04
DDR1-279ENST00000515529 SEC24AO95486 1093 aa27.79■■■□□ 2.04
DDR1-279ENST00000515529 ASS1P00966 412 aaKnown RBP27.79■■■□□ 2.04
DDR1-279ENST00000515529 ACAT1P24752 427 aaKnown RBP27.79■■■□□ 2.04
DDR1-279ENST00000515529 GNL1P36915 607 aaPredicted RBP27.79■■■□□ 2.04
DDR1-279ENST00000515529 LIMS2Q7Z4I7 341 aa27.79■■■□□ 2.04
DDR1-279ENST00000515529 OSTM1Q86WC4 334 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms