RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 BFSP1Q12934 665 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 UBXN2BQ14CS0 331 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 SURF1Q15526 300 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 TEAD2Q15562 447 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 DNAJB7Q7Z6W7 309 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-215ENST00000515516 PJA1Q8NG27 643 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 OR10T2Q8NGX3 314 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 ZSCAN18Q8TBC5 510 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-215ENST00000515516 E2F7Q96AV8 911 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 ANKRD36BP1Q96IX9 119 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 ASB16Q96NS5 453 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 GCNAQ96QF7 691 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 NELL2Q99435 816 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 C7orf25Q9BPX7 421 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 FGFBP2Q9BYJ0 223 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 BCO2Q9BYV7 579 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 PLA2G2FQ9BZM2 168 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 FOXQ1Q9C009 403 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 KIAA1586Q9HCI6 787 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 ITGA11Q9UKX5 1188 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 MRPS17Q9Y2R5 130 aaKnown RBP14.73□□□□□ -0.05
TCOF1-215ENST00000515516 MYH11P35749 1972 aa14.73□□□□□ -0.05
TCOF1-215ENST00000515516 A0A1W2PRU2 124 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 FAM170BA6NMN3 283 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 PROB1E7EW31 1015 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 NCAM2O15394 837 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 TNNC2P02585 160 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 NBL1P41271 181 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 MYO1EQ12965 1108 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 GRM2Q14416 872 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 ARHGAP15Q53QZ3 475 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 FAM26FQ5R3K3 315 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 CNNM4Q6P4Q7 775 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 ZNF852Q6ZMS4 543 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 TPRG1Q6ZUI0 275 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 YAF2Q8IY57 180 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 CEP57L1Q8IYX8 460 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 LRRC52Q8N7C0 313 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 ZSWIM2Q8NEG5 633 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 SHKBP1Q8TBC3 707 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 SPPL2BQ8TCT7 592 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 DEPDC1BQ8WUY9 529 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 DNASE1L2Q92874 299 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 IRF7Q92985 503 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 HPS3Q969F9 1004 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 PSMG2Q969U7 264 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 ZSWIM3Q96MP5 696 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 CRISPLD1Q9H336 500 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 ATXN3LQ9H3M9 355 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 PDE11AQ9HCR9 933 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 PCDHA7Q9UN72 937 aa14.72□□□□□ -0.05
TCOF1-215ENST00000515516 CITO14578 2027 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 DPYSL4O14531 572 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 ZNF263O14978 683 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 MOSPD3O75425 235 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 SOAT2O75908 522 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 PSMC3P17980 439 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 GDI1P31150 447 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 MYL7Q01449 175 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 DUOXA2Q1HG44 320 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 UNC13DQ70J99 1090 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 HS2ST1Q7LGA3 356 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 FRMD5Q7Z6J6 570 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 C1orf210Q8IVY1 113 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 TMEM86AQ8N2M4 240 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 C1orf127Q8N9H9 656 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 ZNF507Q8TCN5 953 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 NKD2Q969F2 451 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-215ENST00000515516 BORCS6Q96GS4 357 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 OSBPL6Q9BZF3 934 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 DNAJC25Q9H1X3 360 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 TRPV4Q9HBA0 871 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 ABI2Q9NYB9 513 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-215ENST00000515516 HSPBP1Q9NZL4 362 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 PCDHB5Q9Y5E4 795 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 KMT2EQ8IZD2 1858 aa14.71□□□□□ -0.05
TCOF1-215ENST00000515516 UBE4BO95155 1302 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-215ENST00000515516 MAN2B1O00754 1011 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 FCARP24071 287 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 GABRR2P28476 465 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 CDC25CP30307 473 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 VIPR2P41587 438 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 MAGEA9P43362 315 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 AFMP43652 599 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 SNRPFP62306 86 aaKnown RBP14.7□□□□□ -0.06
TCOF1-215ENST00000515516 DNM1Q05193 864 aaKnown RBP14.7□□□□□ -0.06
TCOF1-215ENST00000515516 NFE2Q16621 373 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-215ENST00000515516 RESP18Q5W5W9 173 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 POTEHQ6S545 545 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 VITQ6UXI7 678 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 TMC8Q8IU68 726 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 MFSD6LQ8IWD5 586 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 PDCL2Q8N4E4 241 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 TTC9BQ8N6N2 239 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 GLIS3Q8NEA6 775 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 FNBP1Q96RU3 617 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 ACBD6Q9BR61 282 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 DDX23Q9BUQ8 820 aaKnown RBP14.7□□□□□ -0.06
TCOF1-215ENST00000515516 LRRC3Q9BY71 257 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms