RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 RFX7Q2KHR2 1363 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 SUPT3HB4E1H0 165 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 SUPT3HO75486 399 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 ZSCAN26Q16670 478 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 MED24O75448 989 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 KCNA2P16389 499 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 AVPR1AP37288 418 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 DDR1Q08345 913 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 STK4Q13043 487 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRIO-222ENST00000515144 C20orf96Q9NUD7 363 aaPredicted RBP15.09■□□□□ 0.01
TRIO-222ENST00000515144 ADA2Q9NZK5 511 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 MYH15Q9Y2K3 1946 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 MAPK13O15264 365 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 IZUMO3Q5VZ72 239 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 C11orf74Q86VG3 221 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 ARL8AQ96BM9 186 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 CD274Q9NZQ7 290 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 BFARQ9NZS9 450 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 SLC11A2P49281 568 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 ANTXR2P58335 489 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 HIF1AQ16665 826 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 POM121L1PQ3SYA9 428 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 C6orf118Q5T5N4 469 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 PKN3Q6P5Z2 889 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 PTPRN2Q92932 1015 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 PARD6BQ9BYG5 372 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 TMEM8AQ9HCN3 771 aa15.08■□□□□ 0.01
TRIO-222ENST00000515144 AMHP03971 560 aa15.08■□□□□ 0
TRIO-222ENST00000515144 RALBP11234 206 aa15.08■□□□□ 0
TRIO-222ENST00000515144 LRRC14Q15048 493 aa15.08■□□□□ 0
TRIO-222ENST00000515144 BLOC1S5Q8TDH9 187 aa15.08■□□□□ 0
TRIO-222ENST00000515144 PDS5AQ29RF7 1337 aaKnown RBP15.08■□□□□ 0
TRIO-222ENST00000515144 ESRRAP11474 423 aaPredicted RBP15.08■□□□□ 0
TRIO-222ENST00000515144 ACAD11Q709F0 780 aa15.08■□□□□ 0
TRIO-222ENST00000515144 FHOD1Q9Y613 1164 aa15.08■□□□□ 0
TRIO-222ENST00000515144 NWD1Q149M9 1564 aa15.08■□□□□ 0
TRIO-222ENST00000515144 ZNF512BQ96KM6 892 aaPredicted RBP15.08■□□□□ 0
TRIO-222ENST00000515144 RASSF4Q9H2L5 321 aa15.08■□□□□ 0
TRIO-222ENST00000515144 EPHB2P29323 1055 aa15.08■□□□□ 0
TRIO-222ENST00000515144 FMR1Q06787 632 aaKnown RBP eCLIP15.08■□□□□ 0
TRIO-222ENST00000515144 CYP2W1Q8TAV3 490 aa15.08■□□□□ 0
TRIO-222ENST00000515144 SOCS4Q8WXH5 440 aa15.08■□□□□ 0
TRIO-222ENST00000515144 CHST12Q9NRB3 414 aa15.08■□□□□ 0
TRIO-222ENST00000515144 LRRC4BQ9NT99 713 aa15.08■□□□□ 0
TRIO-222ENST00000515144 AMACRQ9UHK6 382 aa15.08■□□□□ 0
TRIO-222ENST00000515144 TMX2Q9Y320 296 aa15.08■□□□□ 0
TRIO-222ENST00000515144 LMTK2Q8IWU2 1503 aa15.08■□□□□ 0
TRIO-222ENST00000515144 MYO1DO94832 1006 aa15.07■□□□□ 0
TRIO-222ENST00000515144 PLCL1Q15111 1095 aa15.07■□□□□ 0
TRIO-222ENST00000515144 P3H1Q32P28 736 aa15.07■□□□□ 0
TRIO-222ENST00000515144 STK33Q9BYT3 514 aa15.07■□□□□ 0
TRIO-222ENST00000515144 GPRC5DQ9NZD1 345 aa15.07■□□□□ 0
TRIO-222ENST00000515144 PPP2R3BQ9Y5P8 575 aa15.07■□□□□ 0
TRIO-222ENST00000515144 F5H5T6 163 aa15.07■□□□□ 0
TRIO-222ENST00000515144 VWA5AO00534 786 aa15.07■□□□□ 0
TRIO-222ENST00000515144 ARIH2O95376 493 aa15.07■□□□□ 0
TRIO-222ENST00000515144 CXCL8P10145 99 aa15.07■□□□□ 0
TRIO-222ENST00000515144 RPA1P27694 616 aa15.07■□□□□ 0
TRIO-222ENST00000515144 ATXN3P54252 364 aaPredicted RBP15.07■□□□□ 0
TRIO-222ENST00000515144 ZNF484Q5JVG2 852 aa15.07■□□□□ 0
TRIO-222ENST00000515144 MSRAQ9UJ68 235 aa15.07■□□□□ 0
TRIO-222ENST00000515144 SCFD1Q8WVM8 642 aa15.07■□□□□ 0
TRIO-222ENST00000515144 SNF8Q96H20 258 aa15.07■□□□□ 0
TRIO-222ENST00000515144 PNMA5Q96PV4 448 aa15.07■□□□□ 0
TRIO-222ENST00000515144 ZNF212Q9UDV6 495 aa15.07■□□□□ 0
TRIO-222ENST00000515144 PXDNLA1KZ92 1463 aa15.07■□□□□ 0
TRIO-222ENST00000515144 IRF6O14896 467 aa15.07■□□□□ 0
TRIO-222ENST00000515144 ACAT1P24752 427 aaKnown RBP15.07■□□□□ 0
TRIO-222ENST00000515144 ERFP50548 548 aa15.07■□□□□ 0
TRIO-222ENST00000515144 ALDH5A1P51649 535 aaPredicted RBP15.07■□□□□ 0
TRIO-222ENST00000515144 BTKQ06187 659 aa15.07■□□□□ 0
TRIO-222ENST00000515144 SPARCL1Q14515 664 aa15.07■□□□□ 0
TRIO-222ENST00000515144 PGM5Q15124 567 aa15.07■□□□□ 0
TRIO-222ENST00000515144 ATXN3LQ9H3M9 355 aa15.07■□□□□ 0
TRIO-222ENST00000515144 DDX4Q9NQI0 724 aaKnown RBP15.07■□□□□ 0
TRIO-222ENST00000515144 MYH9P35579 1960 aaKnown RBP15.07■□□□□ 0
TRIO-222ENST00000515144 MEFVO15553 781 aaPredicted RBP15.07■□□□□ 0
TRIO-222ENST00000515144 EDEM1Q92611 657 aa15.07■□□□□ 0
TRIO-222ENST00000515144 C7orf25Q9BPX7 421 aa15.07■□□□□ 0
TRIO-222ENST00000515144 ELAC2Q9BQ52 826 aaKnown RBP15.07■□□□□ 0
TRIO-222ENST00000515144 FGFR1OP2Q9NVK5 253 aa15.07■□□□□ 0
TRIO-222ENST00000515144 TFR2Q9UP52 801 aa15.07■□□□□ 0
TRIO-222ENST00000515144 MGEA5O60502 916 aa15.07■□□□□ 0
TRIO-222ENST00000515144 RNASEH1O60930 286 aaKnown RBP15.07■□□□□ 0
TRIO-222ENST00000515144 GPRASP2Q96D09 838 aa15.07■□□□□ 0
TRIO-222ENST00000515144 ZFATQ9P243 1243 aa15.07■□□□□ 0
TRIO-222ENST00000515144 CHRM3P20309 590 aa15.06■□□□□ 0
TRIO-222ENST00000515144 GPD1P21695 349 aa15.06■□□□□ 0
TRIO-222ENST00000515144 PLD1Q13393 1074 aa15.06■□□□□ 0
TRIO-222ENST00000515144 PIGHQ14442 188 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 ABHD8Q96I13 439 aa15.06■□□□□ 0
TRIO-222ENST00000515144 GOLPH3Q9H4A6 298 aa15.06■□□□□ 0
TRIO-222ENST00000515144 ARHGEF38Q9NXL2 777 aa15.06■□□□□ 0
TRIO-222ENST00000515144 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 CENPAP49450 140 aa15.06■□□□□ 0
TRIO-222ENST00000515144 DEFB118Q96PH6 123 aa15.06■□□□□ 0
TRIO-222ENST00000515144 PNKPQ96T60 521 aa15.06■□□□□ 0
TRIO-222ENST00000515144 C6orf203Q9P0P8 240 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 PEAK1Q9H792 1746 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms