RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 EFR3BQ9Y2G0 817 aa18.52■□□□□ 0.55
SNX2-213ENST00000514949 UBA1P22314 1058 aaKnown RBP18.51■□□□□ 0.55
SNX2-213ENST00000514949 MORF4L2Q15014 288 aa18.51■□□□□ 0.55
SNX2-213ENST00000514949 SGSM1Q2NKQ1 1148 aa18.51■□□□□ 0.55
SNX2-213ENST00000514949 CDCA2Q69YH5 1023 aaPredicted RBP18.51■□□□□ 0.55
SNX2-213ENST00000514949 SPOCD1Q6ZMY3 1216 aa18.51■□□□□ 0.55
SNX2-213ENST00000514949 GSTA5Q7RTV2 222 aa18.51■□□□□ 0.55
SNX2-213ENST00000514949 NIF3L1Q9GZT8 377 aa18.51■□□□□ 0.55
SNX2-213ENST00000514949 PPCSQ9HAB8 311 aa18.51■□□□□ 0.55
SNX2-213ENST00000514949 FZD9O00144 591 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 ITGAVP06756 1048 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 ALDH5A1P51649 535 aaPredicted RBP18.5■□□□□ 0.55
SNX2-213ENST00000514949 FSTL1Q12841 308 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 ATP13A4Q4VNC1 1196 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 POLNQ7Z5Q5 900 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 C9orf72Q96LT7 481 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 FAM118BQ9BPY3 351 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 MRPL4Q9BYD3 311 aaKnown RBP18.5■□□□□ 0.55
SNX2-213ENST00000514949 PHACTR1Q9C0D0 580 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 FHDC1Q9C0D6 1143 aaPredicted RBP18.5■□□□□ 0.55
SNX2-213ENST00000514949 KCNK9Q9NPC2 374 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
SNX2-213ENST00000514949 IVNS1ABPQ9Y6Y0 642 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 LTBP3Q9NS15 1303 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 hCG_1818297A0A087WSY0 165 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 ABLIM1O14639 778 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 TGFB3P10600 412 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 TCF4P15884 667 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 VCPP55072 806 aaKnown RBP18.5■□□□□ 0.55
SNX2-213ENST00000514949 ELF3P78545 371 aaPredicted RBP18.5■□□□□ 0.55
SNX2-213ENST00000514949 RIPK1Q13546 671 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 TFDP3Q5H9I0 405 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 FAM160B1Q5W0V3 765 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 NUGGCQ68CJ6 796 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 SCARA3Q6AZY7 606 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 DNAJC24Q6P3W2 148 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 WDTC1Q8N5D0 677 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 GRAMD1AQ96CP6 724 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 ABCF3Q9NUQ8 709 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 ARL2BPQ9Y2Y0 163 aa18.5■□□□□ 0.55
SNX2-213ENST00000514949 ALOX15BO15296 676 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 MAGEB2O15479 319 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 ATP2C2O75185 946 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 KRT10P13645 584 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 GCAP28676 217 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 CDKN2BP42772 138 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 SSR1P43307 286 aaKnown RBP18.49■□□□□ 0.55
SNX2-213ENST00000514949 STAT5BP51692 787 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 OGDHQ02218 1023 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 CNTN2Q02246 1040 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 NEDD9Q14511 834 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 DUOXA2Q1HG44 320 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 IER5Q5VY09 327 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 FAM228AQ86W67 206 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 MGARPQ8TDB4 240 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 ACO2Q99798 780 aaKnown RBP18.49■□□□□ 0.55
SNX2-213ENST00000514949 CISHQ9NSE2 258 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 NKIRAS1Q9NYS0 192 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 CPSF3Q9UKF6 684 aaKnown RBP18.49■□□□□ 0.55
SNX2-213ENST00000514949 SHOC2Q9UQ13 582 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 ZNF148Q9UQR1 794 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 TTLL13PA6NNM8 815 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 F8VP50 259 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 OGTO15294 1046 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 GAS2O43903 313 aaKnown RBP18.49■□□□□ 0.55
SNX2-213ENST00000514949 GH1P01241 217 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 KRT1P04264 644 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 SSTR3P32745 418 aaPredicted RBP18.49■□□□□ 0.55
SNX2-213ENST00000514949 WLSQ5T9L3 541 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 SEPT14Q6ZU15 432 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 SPATA21Q7Z572 469 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 TRABD2AQ86V40 505 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 GLIS1Q8NBF1 620 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 PRPF31Q8WWY3 499 aaKnown RBP18.49■□□□□ 0.55
SNX2-213ENST00000514949 FAM167AQ96KS9 214 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 MCEEQ96PE7 176 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 FRMD8P1Q9BZ68 369 aaPredicted RBP18.49■□□□□ 0.55
SNX2-213ENST00000514949 PCDH9Q9HC56 1237 aa18.49■□□□□ 0.55
SNX2-213ENST00000514949 FAM47DPA6NHR8 397 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 PI4K2BG5E9Z4 385 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 PRPF4O43172 522 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNX2-213ENST00000514949 STX2P32856 288 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 TNFSF9P41273 254 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 ARSEP51690 589 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 MYL6P60660 151 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 BNIP1Q12981 228 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 ACVR2BQ13705 512 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 MTFR1Q15390 333 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 WDR72Q3MJ13 1102 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 RNASEH2BQ5TBB1 312 aaKnown RBP18.48■□□□□ 0.55
SNX2-213ENST00000514949 DCUN1D2Q6PH85 259 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 LBX2Q6XYB7 198 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 RGS9BPQ6ZS82 235 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 SRRM1Q8IYB3 904 aaKnown RBP18.48■□□□□ 0.55
SNX2-213ENST00000514949 ANKRD42Q8N9B4 389 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 CCDC63Q8NA47 563 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 SLC35B2Q8TB61 432 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 FNIP1Q8TF40 1166 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 YY1AP1Q9H869 796 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms