RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RECQL4O94761 1208 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 CFIP05156 583 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 THP07101 528 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 IFIT2P09913 472 aaKnown RBP6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 CHRM3P20309 590 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 AK2P54819 239 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 RPS16P62249 146 aaKnown RBP6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 MC2RQ01718 297 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 FAM160B1Q5W0V3 765 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 DNAJC5GQ8N7S2 189 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 PMM1Q92871 262 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 MSLNLQ96KJ4 702 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 MPHOSPH6Q99547 160 aaKnown RBP6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 ELAC2Q9BQ52 826 aaKnown RBP6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 SPATA5L1Q9BVQ7 753 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 ZNF703Q9H7S9 590 aaPredicted RBP6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 AURKAIP1Q9NWT8 199 aaPredicted RBP6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 HESX1Q9UBX0 185 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 FPGT-TNNI3KV9GXZ4 949 aa6.34□□□□□ -1.39
HMGCS1-207ENST00000514610 POLRMTO00411 1230 aaKnown RBP6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 DCLK1O15075 740 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 TBC1D4O60343 1298 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 SUN1O94901 812 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 GPANK1O95872 356 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 C1SP09871 688 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 TSHRP16473 764 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 ZKSCAN1P17029 563 aaPredicted RBP6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 RPL17P18621 184 aaKnown RBP6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 HTRA4P83105 476 aaPredicted RBP6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 ZNF844Q08AG5 666 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 IFIT5Q13325 482 aaKnown RBP6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 LMBRD2Q68DH5 695 aaPredicted RBP6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 SLC30A10Q6XR72 485 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 RNF207Q6ZRF8 634 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 TMPRSS9Q7Z410 1059 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 TMEM132CQ8N3T6 1108 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 SLC15A4Q8N697 577 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 SAMD3Q8N6K7 520 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 OR56A3Q8NH54 315 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 GJA10Q969M2 543 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 NACC2Q96BF6 587 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 TRIB1Q96RU8 372 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 CDK5RAP1Q96SZ6 601 aaKnown RBP6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 SMOQ99835 787 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 UNKQ9C0B0 810 aaKnown RBP6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 SMOC2Q9H3U7 446 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 AKIP1Q9NQ31 210 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 XPR1Q9UBH6 696 aa6.33□□□□□ -1.4
HMGCS1-207ENST00000514610 NCANO14594 1321 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 CCDC195A0A1B0GUA6 201 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 RASA4BC9J798 803 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 RASA4O43374 803 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 SPATA31D3P0C874 917 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 PIGFQ07326 219 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 DAG1Q14118 895 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 BEAN1Q3B7T3 259 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 SPATS1Q496A3 300 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 NRN1LQ496H8 165 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 DCAF12L1Q5VU92 463 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 TAF2Q6P1X5 1199 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 SPATA31D4Q6ZUB0 917 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 SRLQ86TD4 932 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 MORC1Q86VD1 984 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 LIX1LQ8IVB5 337 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 RNF152Q8N8N0 203 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 PSD4Q8NDX1 1056 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 POC1BQ8TC44 478 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 RIPOR3Q96MK2 946 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 MED15Q96RN5 788 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 RPS6KC1Q96S38 1066 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 ADAM2Q99965 735 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 ZNF518BQ9C0D4 1074 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 SIK2Q9H0K1 926 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 KCNE5Q9UJ90 142 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 TMX2Q9Y320 296 aa6.32□□□□□ -1.4
HMGCS1-207ENST00000514610 POM121BA6NF01 834 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 NCK2O43639 380 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 IL1R1P14778 569 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 KCNA2P16389 499 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 CXADRP78310 365 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 DGCR2P98153 550 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 RAB32Q13637 225 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 BRD3Q15059 726 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 GEN1Q17RS7 908 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 KLHDC7AQ5VTJ3 777 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 XRRA1Q6P2D8 792 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 ZNF276Q8N554 614 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 SLC46A1Q96NT5 459 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 MYD88Q99836 296 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 PARPBPQ9NWS1 579 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 DKK2Q9UBU2 259 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 TBC1D30Q9Y2I9 924 aa6.31□□□□□ -1.4
HMGCS1-207ENST00000514610 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
HMGCS1-207ENST00000514610 FOXN3O00409 490 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms