RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 LRRC8AQ8IWT6 810 aa17.04■□□□□ 0.32
TRIM41-206ENST00000514219 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
TRIM41-206ENST00000514219 CRIPAKQ8N1N5 446 aa17.04■□□□□ 0.32
TRIM41-206ENST00000514219 ZBED2Q9BTP6 218 aa17.04■□□□□ 0.32
TRIM41-206ENST00000514219 NXF1Q9UBU9 619 aaKnown RBP17.04■□□□□ 0.32
TRIM41-206ENST00000514219 INSL6Q9Y581 213 aa17.04■□□□□ 0.32
TRIM41-206ENST00000514219 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
TRIM41-206ENST00000514219 SF3B1O75533 1304 aaKnown RBP eCLIP17.03■□□□□ 0.321e-22■■■■■ 183.8
TRIM41-206ENST00000514219 SSU72P8A0A1W2PR75 194 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 ARHGAP6O43182 974 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 TACC1O75410 805 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 CST3P01034 146 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-206ENST00000514219 KRT5P13647 590 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 USP8P40818 1118 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 LHX1P48742 406 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 KLK7P49862 253 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 ADKP55263 362 aaKnown RBP17.03■□□□□ 0.32
TRIM41-206ENST00000514219 LILRA4P59901 499 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 NHLH1Q02575 133 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 STILQ15468 1287 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 NAB2Q15742 525 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 MEA1Q16626 185 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 ARHGAP44Q17R89 818 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 TDRD12Q587J7 1177 aaKnown RBP17.03■□□□□ 0.32
TRIM41-206ENST00000514219 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 TC2NQ8N9U0 490 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 BAP1Q92560 729 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 TNIP3Q96KP6 325 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 CCDC42Q96M95 316 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 PI4K2AQ9BTU6 479 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 SNX25Q9H3E2 840 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 CEP83Q9Y592 693 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 SNX9Q9Y5X1 595 aa17.03■□□□□ 0.32
TRIM41-206ENST00000514219 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 MEIS3P2A8K0S8 358 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 LPXNO60711 386 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 UPP2O95045 317 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 PAEPP09466 180 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 PCSK1P29120 753 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 DEKP35659 375 aaKnown RBP17.02■□□□□ 0.32
TRIM41-206ENST00000514219 PRKCIP41743 596 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 ASPAP45381 313 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 CLCNKBP51801 687 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 INCA1Q0VD86 236 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 BTG3Q14201 252 aaPredicted RBP17.02■□□□□ 0.32
TRIM41-206ENST00000514219 SPOUT1Q5T280 376 aaKnown RBP17.02■□□□□ 0.32
TRIM41-206ENST00000514219 COLGALT2Q8IYK4 626 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 FAM71AQ8IYT1 594 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 CXorf38Q8TB03 319 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 CISHQ9NSE2 258 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 BARX2Q9UMQ3 279 aaPredicted RBP17.02■□□□□ 0.32
TRIM41-206ENST00000514219 CNTN6Q9UQ52 1028 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 FAN1Q9Y2M0 1017 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 PCDHB4Q9Y5E5 795 aa17.02■□□□□ 0.32
TRIM41-206ENST00000514219 TRIP11Q15643 1979 aa17.02■□□□□ 0.31
TRIM41-206ENST00000514219 TRIOO75962 3097 aa17.02■□□□□ 0.31
TRIM41-206ENST00000514219 SYN3O14994 580 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 LRRN2O75325 713 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 TADA2AO75478 443 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 FECHP22830 423 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 OR1G1P47890 313 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 AARSP49588 968 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRIM41-206ENST00000514219 BMS1Q14692 1282 aaKnown RBP17.01■□□□□ 0.31
TRIM41-206ENST00000514219 SPA17Q15506 151 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 MAPRE1Q15691 268 aaKnown RBP17.01■□□□□ 0.31
TRIM41-206ENST00000514219 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRIM41-206ENST00000514219 ARHGEF19Q8IW93 802 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 GJD3Q8N144 294 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 THEM5Q8N1Q8 247 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 ZNF558Q96NG5 402 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 NT5C1AQ9BXI3 368 aa17.01■□□□□ 0.31
TRIM41-206ENST00000514219 CYB561D2O14569 222 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 EPHB6O15197 1021 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 GJB5O95377 273 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 SKILP12757 684 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 TYMPP19971 482 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 SNX16P57768 344 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 KRT83P78385 493 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 SOX4Q06945 474 aaPredicted RBP17■□□□□ 0.31
TRIM41-206ENST00000514219 C10orf76Q5T2E6 689 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 TMEM270Q6UE05 265 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 HERC6Q8IVU3 1022 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 ADGRF2Q8IZF7 708 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 MSANTD4Q8NCY6 345 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 TATDN2Q93075 761 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 ZNF689Q96CS4 500 aaPredicted RBP17■□□□□ 0.31
TRIM41-206ENST00000514219 SUSD3Q96L08 255 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 RAD9AQ99638 391 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 APOBEC3GQ9HC16 384 aaKnown RBP17■□□□□ 0.31
TRIM41-206ENST00000514219 RNF19AQ9NV58 838 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 ADAM28Q9UKQ2 775 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 PCDHB12Q9Y5F1 795 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 TET1Q8NFU7 2136 aa17■□□□□ 0.31
TRIM41-206ENST00000514219 AKR1B10O60218 316 aa16.99■□□□□ 0.31
TRIM41-206ENST00000514219 GUCY2FP51841 1108 aa16.99■□□□□ 0.31
TRIM41-206ENST00000514219 SLC8A3P57103 927 aa16.99■□□□□ 0.31
TRIM41-206ENST00000514219 CREMQ03060 361 aa16.99■□□□□ 0.31
TRIM41-206ENST00000514219 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms