RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 SART3Q15020 963 aaKnown RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 UBE2SQ16763 222 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 IFIT1BQ5T764 474 aaKnown RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 TSHZ3Q63HK5 1081 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 NAIF1Q69YI7 327 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 ANKS3Q6ZW76 656 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 HACE1Q8IYU2 909 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 TRMT2AQ8IZ69 625 aaKnown RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 RGL4Q8IZJ4 473 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 PGBD3Q8N328 593 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 CCDC33Q8N5R6 958 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 EXD3Q8N9H8 876 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 USP33Q8TEY7 942 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 SLC7A3Q8WY07 619 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 EZH1Q92800 747 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 HSPA12BQ96MM6 686 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 EBF3Q9H4W6 596 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 GAREM1Q9H706 876 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 PSTPIP2Q9H939 334 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 IL21RQ9HBE5 538 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 HPS4Q9NQG7 708 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 STARD5Q9NSY2 213 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 SUCLA2Q9P2R7 463 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 PCDHA6Q9UN73 950 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 PCDHA8Q9Y5H6 950 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 NUP210Q8TEM1 1887 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 CYTH3O43739 400 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 CILPO75339 1184 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 ABLIM3O94929 683 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 PRAMEF12O95522 483 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 SREBF1P36956 1147 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 MATKP42679 507 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 NT5C2P49902 561 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 SEC13P55735 322 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 CLDN6P56747 220 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 SCRN1Q12765 414 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 CEP55Q53EZ4 464 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 ZKSCAN2Q63HK3 967 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 TRIM68Q6AZZ1 485 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 KSR1Q8IVT5 923 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 TRIML1Q8N9V2 468 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 GSTCDQ8NEC7 633 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 HMGB4Q8WW32 186 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 CD101Q93033 1021 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 FAM83CQ9BQN1 747 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 UBAC1Q9BSL1 405 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 POLR3CQ9BUI4 534 aaPredicted RBP8.45□□□□□ -1.06
CLDND1-229ENST00000513988 EIF2AQ9BY44 585 aaKnown RBP8.45□□□□□ -1.06
CLDND1-229ENST00000513988 BTBD3Q9Y2F9 522 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 FNDC3AQ9Y2H6 1198 aaKnown RBP8.45□□□□□ -1.06
CLDND1-229ENST00000513988 PCDHGB2Q9Y5G2 931 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 SPG11Q96JI7 2443 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
CLDND1-229ENST00000513988 ADGRG4Q8IZF6 3080 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 ANO9A1A5B4 782 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 KLK10O43240 276 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 ARSAP15289 507 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 AFMP43652 599 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 COPS2P61201 443 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 PRKCEQ02156 737 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 SUZ12Q15022 739 aaKnown RBP8.44□□□□□ -1.06
CLDND1-229ENST00000513988 ARHGAP15Q53QZ3 475 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 SYCP2LQ5T4T6 812 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 GPR158Q5T848 1215 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 SLC8B1Q6J4K2 584 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 USP49Q70CQ1 688 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 SLC41A1Q8IVJ1 513 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 SMAP1Q8IYB5 467 aaPredicted RBP8.44□□□□□ -1.06
CLDND1-229ENST00000513988 KCNE4Q8WWG9 221 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 TRIM6Q9C030 488 aaPredicted RBP8.44□□□□□ -1.06
CLDND1-229ENST00000513988 NXF3Q9H4D5 531 aaKnown RBP8.44□□□□□ -1.06
CLDND1-229ENST00000513988 IFT122Q9HBG6 1241 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 KLK14Q9P0G3 267 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 TBX20Q9UMR3 447 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 SAMM50Q9Y512 469 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 PCDHA10Q9Y5I2 948 aa8.44□□□□□ -1.06
CLDND1-229ENST00000513988 PDZD2O15018 2839 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 MEIS1O00470 390 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 SMARCA5O60264 1052 aaPredicted RBP8.43□□□□□ -1.06
CLDND1-229ENST00000513988 ERLIN2O94905 339 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 HNRNPLP14866 589 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLDND1-229ENST00000513988 AKAP5P24588 427 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 TKTP29401 623 aaKnown RBP8.43□□□□□ -1.06
CLDND1-229ENST00000513988 GJA4P35212 333 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 TPGS2Q68CL5 300 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 XKR5Q6UX68 686 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 DBX2Q6ZNG2 339 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 DHX40Q8IX18 779 aaKnown RBP8.43□□□□□ -1.06
CLDND1-229ENST00000513988 NANOS1Q8WY41 292 aaKnown RBP8.43□□□□□ -1.06
CLDND1-229ENST00000513988 CCDC51Q96ER9 411 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 NIFKQ9BYG3 293 aaKnown RBP8.43□□□□□ -1.06
CLDND1-229ENST00000513988 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 IL21Q9HBE4 155 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 GMIPQ9P107 970 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 ADGRG1Q9Y653 693 aa8.43□□□□□ -1.06
CLDND1-229ENST00000513988 MYLKQ15746 1914 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 KNL1Q8NG31 2342 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 CSMD1Q96PZ7 3565 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms