RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 BROXQ5VW32 411 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 TYW1BQ6NUM6 668 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
SFXN1-210ENST00000513725 GAREM2Q75VX8 874 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 CDR2LQ86X02 465 aaPredicted RBP13.03□□□□□ -0.32
SFXN1-210ENST00000513725 CCDC33Q8N5R6 958 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 IGDCC4Q8TDY8 1250 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 TMEM176AQ96HP8 235 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 UROC1Q96N76 676 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 SMG9Q9H0W8 520 aaKnown RBP13.03□□□□□ -0.32
SFXN1-210ENST00000513725 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
SFXN1-210ENST00000513725 PPME1Q9Y570 386 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 ARID2Q68CP9 1835 aa13.02□□□□□ -0.32
SFXN1-210ENST00000513725 HELZP42694 1942 aaKnown RBP13.02□□□□□ -0.32
SFXN1-210ENST00000513725 FBN2P35556 2912 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 A0A1B0GUA9 196 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 TERTO14746 1132 aaKnown RBP13.02□□□□□ -0.33
SFXN1-210ENST00000513725 FLRT2O43155 660 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 CPB1P15086 417 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 HNF1BP35680 557 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 RFC5P40937 340 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 ALDH1A3P47895 512 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 TFDP1Q14186 410 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 UPP1Q16831 310 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 CCDC157Q569K6 752 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 ARHGAP40Q5TG30 622 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 RGL4Q8IZJ4 473 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 TTC9Q92623 222 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 CEP170P1Q96L14 293 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 DHX33Q9H6R0 707 aaKnown RBP13.02□□□□□ -0.33
SFXN1-210ENST00000513725 ASB3Q9Y575 518 aa13.02□□□□□ -0.33
SFXN1-210ENST00000513725 TBX3O15119 743 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 MSH4O15457 936 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 TNFSF14O43557 240 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 MARCH6O60337 910 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 JUPP14923 745 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 NPEPPSP55786 919 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 MRPS21P82921 87 aaKnown RBP13.01□□□□□ -0.33
SFXN1-210ENST00000513725 MRPL58Q14197 206 aaKnown RBP13.01□□□□□ -0.33
SFXN1-210ENST00000513725 MXD4Q14582 209 aaPredicted RBP13.01□□□□□ -0.33
SFXN1-210ENST00000513725 ZNF280DQ6N043 979 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 DHRS13Q6UX07 377 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 CD300LGQ6UXG3 332 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
SFXN1-210ENST00000513725 ENGASEQ8NFI3 743 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 NCOA7Q8NI08 942 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 HMGB4Q8WW32 186 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 GCNAQ96QF7 691 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 DNAJC25Q9H1X3 360 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 TM7SF3Q9NS93 570 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 SEPT3Q9UH03 358 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 ZMYM5Q9UJ78 669 aa13.01□□□□□ -0.33
SFXN1-210ENST00000513725 hCG_1984214I3L0E3 225 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 B4GALT5O43286 388 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 RECQL4O94761 1208 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 CER1O95813 267 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 RXRAP19793 462 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 CIITAP33076 1130 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 ACTN2P35609 894 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 PDE1AP54750 535 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 PSMC5P62195 406 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 POU5F1BQ06416 359 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 SCRN1Q12765 414 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 BFSP1Q12934 665 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 RTP5Q14D33 572 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 SUZ12Q15022 739 aaKnown RBP13□□□□□ -0.33
SFXN1-210ENST00000513725 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 ATG14Q6ZNE5 492 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 DNAJB7Q7Z6W7 309 aaPredicted RBP13□□□□□ -0.33
SFXN1-210ENST00000513725 ZNF713Q8N859 430 aaPredicted RBP13□□□□□ -0.33
SFXN1-210ENST00000513725 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 PSMG2Q969U7 264 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 LENG9Q96B70 501 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 HSPA12BQ96MM6 686 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 LGMNQ99538 433 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 NRSN2Q9GZP1 204 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 KIF9Q9HAQ2 790 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
SFXN1-210ENST00000513725 PCDHGB2Q9Y5G2 931 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 ITPR3Q14573 2671 aa13□□□□□ -0.33
SFXN1-210ENST00000513725 CCDC69A6NI79 296 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 K7EQS6 105 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 KRT10P13645 584 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 HNRNPLP14866 589 aaKnown RBP eCLIP12.99□□□□□ -0.335e-33■■■■□ 19.7
SFXN1-210ENST00000513725 CR2P20023 1033 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 AVPR1AP37288 418 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 CYP4F8P98187 520 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 NFATC3Q12968 1075 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 DBX2Q6ZNG2 339 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 TMTC3Q6ZXV5 915 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 ITIH5Q86UX2 942 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms