RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 EFR3BQ9Y2G0 817 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 ZNF318Q5VUA4 2279 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 USP34Q70CQ2 3546 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 A0A0U1RQG5 324 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 CAPN14A8MX76 684 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 DUSP11O75319 330 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 CABYRO75952 493 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 CIAO1O76071 339 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 BAG3O95817 575 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 SLC25A27O95847 323 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 PGK1P00558 417 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 ATP2A2P16615 1042 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 ATF4P18848 351 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 RRADP55042 308 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 MECOMQ03112 1051 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 HGFACQ04756 655 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 SPIRE1Q08AE8 756 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 ATP2B3Q16720 1220 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 PRSS53Q2L4Q9 553 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 TATDN1Q6P1N9 297 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 OTOP2Q7RTS6 562 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 MRGPREQ86SM8 312 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 ANKRD35Q8N283 1001 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 TMEM145Q8NBT3 493 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 LENG9Q96B70 501 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 NSUN4Q96CB9 384 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 NOL10Q9BSC4 688 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 JAM3Q9BX67 310 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 LGR4Q9BXB1 951 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 SPATC1LQ9H0A9 340 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 SIL1Q9H173 461 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 BICC1Q9H694 974 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 SPC25Q9HBM1 224 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 HECAQ9UBI9 543 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 PACSIN3Q9UKS6 424 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 FAM184BQ9ULE4 1060 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 ZBTB21Q9ULJ3 1066 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 FAM50BQ9Y247 325 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 CNPY2Q9Y2B0 182 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 TELO2Q9Y4R8 837 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 REV3LO60673 3130 aa4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 ZFHX2Q9C0A1 2572 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-218ENST00000513341 CHD7Q9P2D1 2997 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 A0A1B0GUL7 405 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 ACOT7O00154 380 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 ERBB2P04626 1255 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 ASGR1P07306 291 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 ACTN1P12814 892 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 VCAM1P19320 739 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 CD38P28907 300 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 CYP2C18P33260 490 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 COPB2P35606 906 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 IL15P40933 162 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 DBPQ10586 325 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 MAP4K2Q12851 820 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 STILQ15468 1287 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 SF1Q15637 639 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 ZNF662Q6ZS27 426 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 KCTD1Q719H9 257 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 RHOUQ7L0Q8 258 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 ATG9AQ7Z3C6 839 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 CERS3Q8IU89 383 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 TEX11Q8IYF3 940 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 ANKRD44Q8N8A2 993 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 HAS1Q92839 578 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 TSR2Q969E8 191 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 PPP1R14AQ96A00 147 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 BBC3Q96PG8 261 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 OR10A2Q9H208 303 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 UBE2ZQ9H832 354 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 CABP5Q9NP86 173 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 HDAC5Q9UQL6 1122 aa4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 PTPRZ1P23471 2315 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-218ENST00000513341 PROB1E7EW31 1015 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 SLC26A4O43511 780 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 LPXNO60711 386 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 LTFP02788 710 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 HLA-DOAP06340 250 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 CA3P07451 260 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 SUPT20HL2P0C7V6 817 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 RFC2P35250 354 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 PHKA1P46020 1223 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 KCNJ6P48051 423 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 RFX5P48382 616 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 RABGGTBP53611 331 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 TAP1Q03518 808 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 RASGRF1Q13972 1273 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 KCTD2Q14681 263 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 PCOLCEQ15113 449 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 MBNL2Q5VZF2 373 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 PAPD7Q5XG87 772 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 SLC4A10Q6U841 1118 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 LARP4Q71RC2 724 aaKnown RBP eCLIP4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 GPR150Q8NGU9 434 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 KLHDC4Q8TBB5 520 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 NEK9Q8TD19 979 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 ZNF384Q8TF68 577 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 CPLX3Q8WVH0 158 aa4.42□□□□□ -1.7
PDLIM5-218ENST00000513341 FEZ1Q99689 392 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 1017.8 ms