RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 PPP4R4Q6NUP7 873 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 LRRC8AQ8IWT6 810 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 ADGRF2Q8IZF7 708 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SUSD6Q92537 303 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 NCLNQ969V3 563 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 CCDC138Q96M89 665 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SENP7Q9BQF6 1050 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 COPS7BQ9H9Q2 264 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 EPB41L5Q9HCM4 733 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PKD2L2Q9NZM6 624 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 C5orf58C9J3I9 102 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PDE2AO00408 941 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 ITGB3P05106 788 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 ZBTB48P10074 688 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 GHRP10912 638 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 DNAJB2P25686 324 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PRCPP42785 496 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PDCD2Q16342 344 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 KIZQ2M2Z5 673 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 OVOS1Q6IE37 1185 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 CARNMT1Q8N4J0 409 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 ATP11CQ8NB49 1132 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 RFFLQ8WZ73 363 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 AHCYL2Q96HN2 611 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 FMO2Q99518 471 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 TRIM55Q9BYV6 548 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 MED4Q9NPJ6 270 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 LATS2Q9NRM7 1088 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SAMSN1Q9NSI8 373 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 FBXO28Q9NVF7 368 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 ARHGEF38Q9NXL2 777 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 KLK14Q9P0G3 267 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 M0QYT0 321 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 KCNA2P16389 499 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 AARSP49588 968 aaKnown RBP eCLIP4.45□□□□□ -1.7
VCAN-209ENST00000513016 BCAT1P54687 386 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PRKAA1Q13131 559 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SLC27A1Q6PCB7 646 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 VSTM4Q8IW00 320 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 MIPOL1Q8TD10 442 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 OXER1Q8TDS5 423 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SYTL5Q8TDW5 730 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 PPP1R16AQ96I34 528 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SYT17Q9BSW7 474 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 WDR18Q9BV38 432 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 APEX2Q9UBZ4 518 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 FBXO10Q9UK96 956 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 ITGA11Q9UKX5 1188 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 NRCAMQ92823 1304 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 A0A1W2PQC6 194 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 ATP9BO43861 1147 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PCDH8O95206 1070 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 BAG2O95816 211 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 LAG3P18627 525 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 RRM1P23921 792 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SREBF1P36956 1147 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 HALP42357 657 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 CAPZA2P47755 286 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SERPINB9P50453 376 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PDCLQ13371 301 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 DPCR1Q3MIW9 517 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 DNAJB3Q8WWF6 145 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 APBB2Q92870 758 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SPDL1Q96EA4 605 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 FAM163AQ96GL9 167 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 TSPAN18Q96SJ8 248 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 REEP2Q9BRK0 252 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 RTFDC1Q9BY42 306 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 FRMD8Q9BZ67 464 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 MAP10Q9P2G4 905 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 A0A087WUV0 522 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 FRMD3A2A2Y4 597 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 IFRD1O00458 451 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 TRIM66O15016 1216 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 CYP2A6P11509 494 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 GUCY2CP25092 1073 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 LIG3P49916 1009 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 CLCN3P51790 818 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 HDAC4P56524 1084 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 HPCAP84074 193 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 KCNA1Q09470 495 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 TOB2Q14106 344 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 VGLL4Q14135 290 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 TTC31Q49AM3 519 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 C15orf52Q6ZUT6 534 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 HS6ST3Q8IZP7 471 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SYT2Q8N9I0 419 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 REPS2Q8NFH8 660 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 GLMNQ92990 594 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PPWD1Q96BP3 646 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 FRMD8P1Q9BZ68 369 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 KRT82Q9NSB4 513 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 NDE1Q9NXR1 346 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 TPX2Q9ULW0 747 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 TBX20Q9UMR3 447 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 ATP8A1Q9Y2Q0 1164 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 PCDHB9Q9Y5E1 797 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 A0A087WWV3 80 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 PRR23AA6NEV1 266 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ZNF839A8K0R7 811 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms