RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 PRMT6Q96LA8 375 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ATP6V1G3Q96LB4 118 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CCDC43Q96MW1 224 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CMTM3Q96MX0 182 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 DACH2Q96NX9 599 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ACAP3Q96P50 834 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CATSPER2Q96P56 530 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SH3GL3Q99963 347 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 DDX50Q9BQ39 737 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 GLIS2Q9BZE0 524 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 PIH1D3Q9NQM4 214 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 GLRX2Q9NS18 164 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF358Q9NW07 568 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 NMRK1Q9NWW6 199 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CLEC4AQ9UMR7 237 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 FZD1Q9UP38 647 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 APOBEC2Q9Y235 224 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAM205AQ6ZU69 1335 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 C16orf96A6NNT2 1141 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TCP10L2B9ZVM9 353 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAGEB3O15480 346 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 IRAK2O43187 625 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TOMM70O94826 608 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 REC8O95072 547 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 BAG4O95429 457 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 UQCRFS1P1P0C7P4 283 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PDGFRAP16234 1089 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 RPS12P25398 132 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 DPP6P42658 865 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 FXR1P51114 621 aaKnown RBP eCLIP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 RPS6KA3P51812 740 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 AP3M2P53677 418 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PLTPP55058 493 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TCP10Q12799 353 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAP3K12Q12852 859 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 USP39Q53GS9 565 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAM209BQ5JX69 171 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 HGSNATQ68CP4 663 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 KLC3Q6P597 504 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 IYDQ6PHW0 289 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 B3GNT6Q6ZMB0 384 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 CCDC13Q8IYE1 715 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 NEDD1Q8NHV4 660 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 DPF2Q92785 391 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 NCLNQ969V3 563 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TRERF1Q96PN7 1200 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TCF25Q9BQ70 676 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 HGH1Q9BTY7 390 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 MENTQ9BUN1 341 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 GBP3Q9H0R5 595 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAGEH1Q9H213 219 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 DNAJC18Q9H819 358 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PDE11AQ9HCR9 933 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 DMRT3Q9NQL9 472 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 SEMA3GQ9NS98 782 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ECHDC1Q9NTX5 307 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ADPRHL2Q9NX46 363 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PPP1R14DQ9NXH3 145 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 IL20Q9NYY1 176 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRFN1Q9P244 771 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCOLCE2Q9UKZ9 415 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TTC41PQ6P2S7 1318 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 MYO3BQ8WXR4 1341 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ADAMTSL1Q8N6G6 1762 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 DDX3XO00571 662 aaKnown RBP eCLIP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHGA12O60330 932 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 RTN3O95197 1032 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 HLA-DPA1P20036 260 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 HAAOP46952 286 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 HNRNPH2P55795 449 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ACTN3Q08043 901 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 MPP3Q13368 585 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 IKBKEQ14164 716 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PLS1Q14651 629 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 STARD3Q14849 445 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TLR1Q15399 786 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TIGD6Q17RP2 521 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TBCELQ5QJ74 424 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 FCRLBQ6BAA4 426 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 JMJD6Q6NYC1 403 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 RAB11FIP2Q7L804 512 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 FGD2Q7Z6J4 655 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ADGRA1Q86SQ6 560 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 CAND1Q86VP6 1230 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ETFBKMTQ8IXQ9 262 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 CNTROBQ8N137 903 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZMIZ2Q8NF64 920 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF384Q8TF68 577 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAM216AQ8WUB2 273 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 RILPL2Q969X0 211 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 DCPSQ96C86 337 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PDLIM2Q96JY6 352 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 NUP88Q99567 741 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 MTRQ99707 1265 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TSEN34Q9BSV6 310 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 UNC93B1Q9H1C4 597 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 NDFIP2Q9NV92 336 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms