RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 CDC45O75419 566 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 PRR23D2P0DMB1 279 aaPredicted RBP3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 MYCLP1P12525 358 aaPredicted RBP3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 FAPQ12884 760 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 MIDNQ504T8 468 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 CATSPERGQ6ZRH7 1159 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 ZNF365Q70YC5 407 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 GALNT16Q8N428 558 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 TMIEQ8NEW7 156 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 FKBP10Q96AY3 582 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 IMPG2Q9BZV3 1241 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 EBF3Q9H4W6 596 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 DNAJC28Q9NX36 388 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 DNM3Q9UQ16 869 aa3.94□□□□□ -1.78
SCAMP1-204ENST00000511551 SMIM35A0A1B0GVV1 85 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 F5H697 171 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 TRIAP1O43715 76 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 ANXA1P04083 346 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 LPOP22079 712 aaPredicted RBP3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 TRIP6Q15654 476 aaKnown RBP3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 TAPT1Q6NXT6 567 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 ANKRD16Q6P6B7 361 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 RNF180Q86T96 592 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 RHOT1Q8IXI2 618 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 IFI44Q8TCB0 444 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 DPF2Q92785 391 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 TRIB1Q96RU8 372 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 ARHGEF3Q9NR81 526 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 SH3BP4Q9P0V3 963 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 SLC45A2Q9UMX9 530 aa3.93□□□□□ -1.78
SCAMP1-204ENST00000511551 FNDC1Q4ZHG4 1894 aaPredicted RBP3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 MYMKA6NI61 221 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 KCNU1A8MYU2 1149 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 NDUFB7P17568 137 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 PLCD1P51178 756 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 LINC00205P59089 165 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 TARDBPQ13148 414 aaKnown RBP eCLIP3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 RABEP1Q15276 862 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 AARS2Q5JTZ9 985 aaKnown RBP3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 PXDC1Q5TGL8 231 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 SLC17A8Q8NDX2 589 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 SSH1Q8WYL5 1049 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 SMOQ99835 787 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 PACSIN1Q9BY11 444 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 TPSD1Q9BZJ3 242 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 CCM2LQ9NUG4 571 aaPredicted RBP3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 WWOXQ9NZC7 414 aa3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.92□□□□□ -1.78
SCAMP1-204ENST00000511551 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 CCDC187A0A096LP49 1063 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 E9PLN8 166 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 DNAJB5O75953 348 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 NXPH3O95157 252 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 OSMP13725 252 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 NDUFV1P49821 464 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 TWIST1Q15672 202 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 TBCCQ15814 346 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 MEPCEQ7L2J0 689 aaKnown RBP3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 SLC29A4Q7RTT9 530 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 STRA8Q7Z7C7 330 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 FAM109AQ8N4B1 249 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 FANCBQ8NB91 859 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 ADAMTS15Q8TE58 950 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 FBXO41Q8TF61 875 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 UBXN4Q92575 508 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 VKORC1Q9BQB6 163 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 ACTRT3Q9BYD9 372 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 ZNF277Q9NRM2 450 aaPredicted RBP3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 C14orf119Q9NWQ9 140 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 INTUQ9ULD6 942 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 AFG3L2Q9Y4W6 797 aa3.91□□□□□ -1.78
SCAMP1-204ENST00000511551 SMIM22K7EJ46 135 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 BRINP1O60477 761 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 SOAT2O75908 522 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 CDC42EP1Q00587 391 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 STRN3Q13033 797 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 DLK2Q6UY11 383 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 ZNF804AQ7Z570 1209 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 C8orf58Q8NAV2 365 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 NRG4Q8WWG1 115 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 ATRIPQ8WXE1 791 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 TMX3Q96JJ7 454 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 MARK4Q96L34 752 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 TDP1Q9NUW8 608 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 USP35Q9P2H5 1018 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 GPR45Q9Y5Y3 372 aa3.9□□□□□ -1.79
SCAMP1-204ENST00000511551 LOC105371045A0A1W2PR82 267 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 POLRMTO00411 1230 aaKnown RBP3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 SOCS2O14508 198 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 SGTAO43765 313 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 AGXTP21549 392 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 ZNF280AP59817 542 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 IRF2BP2Q7Z5L9 587 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 WDR53Q7Z5U6 358 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 RSPH3Q86UC2 560 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 CHSY1Q86X52 802 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 PDSS2Q86YH6 399 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 AOPEPQ8N6M6 819 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 SMRP1Q8NCR6 262 aa3.89□□□□□ -1.79
SCAMP1-204ENST00000511551 PIGOQ8TEQ8 1089 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms