RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ECHDC2Q86YB7 292 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 TOP6BLQ8N6T0 577 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 GSTCDQ8NEC7 633 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 ZNF653Q96CK0 615 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 ZNF333Q96JL9 665 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 MIS12Q9H081 205 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 SDCBP2Q9H190 292 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 KLK14Q9P0G3 267 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 PUF60Q9UHX1 559 aaKnown RBP16.18■□□□□ 0.18
SCLT1-209ENST00000511426 STRIP2Q9ULQ0 834 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 SNX9Q9Y5X1 595 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 UQCRHLA0A096LP55 91 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 ARHGEF37A1IGU5 675 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 EFCAB8A8MWE9 144 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 UQCRHP07919 91 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 GSCP56915 257 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-209ENST00000511426 NAA35Q5VZE5 725 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 ZNF598Q86UK7 904 aaKnown RBP16.18■□□□□ 0.18
SCLT1-209ENST00000511426 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 WHAMMQ8TF30 809 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 CYFIP2Q96F07 1278 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 TSPYL2Q9H2G4 693 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-209ENST00000511426 ELAC1Q9H777 363 aaKnown RBP16.18■□□□□ 0.18
SCLT1-209ENST00000511426 ABCB6Q9NP58 842 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 CTTNBP2NLQ9P2B4 639 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 ARL5CA6NH57 179 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 MIF4GDA9UHW6 222 aaKnown RBP16.17■□□□□ 0.18
SCLT1-209ENST00000511426 C9IYK1 514 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 DYNC1I1O14576 645 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 ENC1O14682 589 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 MGEA5O60502 916 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 MMP8P22894 467 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 FAM189BP81408 668 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 TAP1Q03518 808 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 ITIH3Q06033 890 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 SGO2Q562F6 1265 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 DAAM2Q86T65 1068 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 DNAJC5GQ8N7S2 189 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 APPL2Q8NEU8 664 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 ARHGEF26Q96DR7 871 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 GAD1Q99259 594 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 TLR10Q9BXR5 811 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 ADAM22Q9P0K1 906 aa16.17■□□□□ 0.18
SCLT1-209ENST00000511426 CNOT8Q9UFF9 292 aaKnown RBP16.17■□□□□ 0.18
SCLT1-209ENST00000511426 HUS1O60921 280 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 SETSIPP0DME0 302 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 CD19P15391 556 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 BRD2P25440 801 aaKnown RBP16.16■□□□□ 0.18
SCLT1-209ENST00000511426 RAP1GAPP47736 663 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 NDST1P52848 882 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 CDH8P55286 799 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 LILRA4P59901 499 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 RPS6KA1Q15418 735 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 CLUL1Q15846 466 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 ZNF394Q53GI3 561 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 PEX26Q7Z412 305 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 TMEM86AQ8N2M4 240 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 ZNF564Q8TBZ8 553 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-209ENST00000511426 OSBPL9Q96SU4 736 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 ELOVL4Q9GZR5 314 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 WDR35Q9P2L0 1181 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 KANSL3Q9P2N6 904 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 AMFRQ9UKV5 643 aa16.16■□□□□ 0.18
SCLT1-209ENST00000511426 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCLT1-209ENST00000511426 DCDC2CA8MYV0 355 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 WARSP23381 471 aaKnown RBP16.15■□□□□ 0.18
SCLT1-209ENST00000511426 SNX16P57768 344 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 SOX4Q06945 474 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-209ENST00000511426 MBTPS1Q14703 1052 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 SOWAHAQ2M3V2 549 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 PLEKHG4Q58EX7 1191 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 PLEKHA7Q6IQ23 1121 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 LCLAT1Q6UWP7 414 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 GLB1LQ6UWU2 654 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 ZNF572Q7Z3I7 529 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-209ENST00000511426 CRYBG2Q8N1P7 616 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 SEPT8Q92599 483 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 PBKQ96KB5 322 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 TNIP3Q96KP6 325 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 ZFP42Q96MM3 310 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 NUP85Q9BW27 656 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 CXCL16Q9H2A7 254 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 OSGEPQ9NPF4 335 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 PARVAQ9NVD7 372 aa16.15■□□□□ 0.18
SCLT1-209ENST00000511426 O00370 1275 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 PPEF2O14830 753 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 BUB1BO60566 1050 aaPredicted RBP16.14■□□□□ 0.18
SCLT1-209ENST00000511426 SLC1A1P43005 524 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.18
SCLT1-209ENST00000511426 TUSC3Q13454 348 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 ARHGAP17Q68EM7 881 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 SLC39A5Q6ZMH5 540 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 NT5DC3Q86UY8 548 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 CPA5Q8WXQ8 436 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 TFAP2BQ92481 460 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 CARD6Q9BX69 1037 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 TMEM161AQ9NX61 479 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 STXBP5LQ9Y2K9 1186 aa16.14■□□□□ 0.18
SCLT1-209ENST00000511426 CTAGE15A4D2H0 777 aa16.14■□□□□ 0.17
SCLT1-209ENST00000511426 PODXLO00592 558 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms