RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 RNF181Q9P0P0 153 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 ARID4BQ4LE39 1312 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 A0A1B0GTW7 788 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 E9PLN8 166 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 FOXN3O00409 490 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 TOR1BO14657 336 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 TRIM24O15164 1050 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 DNAJB5O75953 348 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 IL18RAPO95256 599 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 PIM1P11309 404 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 FGFR4P22455 802 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 STT3AP46977 705 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 SLC11A2P49281 568 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 ARFIP2P53365 341 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 UCP3P55916 312 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 RPS16P62249 146 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 POU6F2P78424 691 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZNF543Q08ER8 600 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 NRN1LQ496H8 165 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 PREPLQ4J6C6 727 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 USP39Q53GS9 565 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 RABL3Q5HYI8 236 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 FAM160B1Q5W0V3 765 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 TAPT1Q6NXT6 567 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 HTR3DQ70Z44 454 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 MORC1Q86VD1 984 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 C1orf210Q8IVY1 113 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 MAPKAPK5Q8IW41 473 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 RIPOR3Q96MK2 946 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 TRIB1Q96RU8 372 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 PSMD1Q99460 953 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 VKORC1Q9BQB6 163 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 STK31Q9BXU1 1019 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 TEX101Q9BY14 249 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 UNKQ9C0B0 810 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 TTYH3Q9C0H2 523 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 NLRC4Q9NPP4 1024 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 MRPS18AQ9NVS2 196 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 DAAM1Q9Y4D1 1078 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 COMMD10Q9Y6G5 202 aa4.17□□□□□ -1.74
TRAPPC11-207ENST00000511409 CCDC195A0A1B0GUA6 201 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 AHRRA9YTQ3 701 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 TMEM233B4DJY2 109 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 RASA4BC9J798 803 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 F8W8V4 182 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 RASA4O43374 803 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 RASSF9O75901 435 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 HLA-DOAP06340 250 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 PARP1P09874 1014 aaKnown RBP4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 ALDH5A1P51649 535 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 OCA2Q04671 838 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 DAG1Q14118 895 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 SPDYE7PQ495Y7 208 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 METRNLQ641Q3 311 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 SKAP1Q86WV1 359 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 TMPRSS6Q8IU80 811 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 RAPGEF4Q8WZA2 1011 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 MAML1Q92585 1016 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 EXTL1Q92935 676 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 GJA10Q969M2 543 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 NMD3Q96D46 503 aaKnown RBP4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 RNF31Q96EP0 1072 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZNF518BQ9C0D4 1074 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 MS4A7Q9GZW8 240 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 PARPBPQ9NWS1 579 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 AURKAIP1Q9NWT8 199 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 COL20A1Q9P218 1284 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 HSFX1Q9UBD0 423 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 XPR1Q9UBH6 696 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 ITGB1BP2Q9UKP3 347 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 HDAC9Q9UKV0 1011 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 DMTF1Q9Y222 760 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 MAP3K2Q9Y2U5 619 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 NOX1Q9Y5S8 564 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 FPGT-TNNI3KV9GXZ4 949 aa4.16□□□□□ -1.74
TRAPPC11-207ENST00000511409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 CCDC78A2IDD5 438 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 TRIM43BA6NCK2 446 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 PYCARD-AS1I3L0S3 204 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 RNASET2O00584 256 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 NCR1O76036 304 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 LDHAP00338 332 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 TNFSF4P23510 183 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 CASP5P51878 434 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZXDAP98168 799 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 SATB1Q01826 763 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 TOB2Q14106 344 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 LONRF3Q496Y0 759 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 FAM209BQ5JX69 171 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 SPDYAQ5MJ70 313 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 KLHDC7AQ5VTJ3 777 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 DCAF12L1Q5VU92 463 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 XRRA1Q6P2D8 792 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 C1orf228Q6PIY5 440 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 LAYNQ6UX15 382 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 DPP9Q86TI2 863 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 PSD4Q8NDX1 1056 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 VPS37AQ8NEZ2 397 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 IL17DQ8TAD2 202 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms