RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 OSTM1Q86WC4 334 aa15.02■□□□□ -0
DDX41-212ENST00000511040 ELOA2Q8IYF1 753 aaPredicted RBP15.02■□□□□ -0
DDX41-212ENST00000511040 TCEAL8Q8IYN2 117 aa15.02■□□□□ -0
DDX41-212ENST00000511040 THEM5Q8N1Q8 247 aa15.02■□□□□ -0
DDX41-212ENST00000511040 TTC9BQ8N6N2 239 aa15.02■□□□□ -0
DDX41-212ENST00000511040 ATAD1Q8NBU5 361 aa15.02■□□□□ -0
DDX41-212ENST00000511040 ST13P5Q8NFI4 369 aaPredicted RBP15.02■□□□□ -0
DDX41-212ENST00000511040 TMEM174Q8WUU8 243 aa15.02■□□□□ -0
DDX41-212ENST00000511040 MYADMQ96S97 322 aa15.02■□□□□ -0
DDX41-212ENST00000511040 OXCT2Q9BYC2 517 aaPredicted RBP15.02■□□□□ -0
DDX41-212ENST00000511040 ZCWPW1Q9H0M4 648 aa15.02■□□□□ -0
DDX41-212ENST00000511040 CRISPLD1Q9H336 500 aa15.02■□□□□ -0
DDX41-212ENST00000511040 GDAP2Q9NXN4 497 aa15.02■□□□□ -0
DDX41-212ENST00000511040 DNMT3BQ9UBC3 853 aaKnown RBP15.02■□□□□ -0
DDX41-212ENST00000511040 LIMD1Q9UGP4 676 aa15.02■□□□□ -0
DDX41-212ENST00000511040 TRIM49BA6NDI0 452 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 DCXO43602 365 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 SOAT2O75908 522 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 ASGR2P07307 311 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 TRIM49P0CI25 452 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 TRIM49CP0CI26 452 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
DDX41-212ENST00000511040 FSHRP23945 695 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 HOXA9P31269 272 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 VAMP7P51809 220 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 TWF1Q12792 350 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 GPR17Q13304 367 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 NFIL3Q16649 462 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 SOWAHAQ2M3V2 549 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 ANKRD40Q6AI12 368 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 KLHL10Q6JEL2 608 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 OTOP3Q7RTS5 596 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 FAM186BQ8IYM0 893 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 ADGRF2Q8IZF7 708 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 ADSSL1Q8N142 457 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 MMS19Q96T76 1030 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 RHOBTB2Q9BYZ6 727 aa15.01□□□□□ -0.01
DDX41-212ENST00000511040 MTMR11A4FU01 709 aa15□□□□□ -0.01
DDX41-212ENST00000511040 FAM86C2PA6NEL3 165 aa15□□□□□ -0.01
DDX41-212ENST00000511040 PI4K2BG5E9Z4 385 aa15□□□□□ -0.01
DDX41-212ENST00000511040 C4BPAP04003 597 aaKnown RBP15□□□□□ -0.01
DDX41-212ENST00000511040 BMP6P22004 513 aa15□□□□□ -0.01
DDX41-212ENST00000511040 PSMC2P35998 433 aaKnown RBP15□□□□□ -0.01
DDX41-212ENST00000511040 CLDN10P78369 228 aa15□□□□□ -0.01
DDX41-212ENST00000511040 CCDC142Q17RM4 750 aa15□□□□□ -0.01
DDX41-212ENST00000511040 EDRF1Q3B7T1 1238 aa15□□□□□ -0.01
DDX41-212ENST00000511040 C1orf220Q5T0J3 134 aa15□□□□□ -0.01
DDX41-212ENST00000511040 CENPPQ6IPU0 288 aa15□□□□□ -0.01
DDX41-212ENST00000511040 ZDHHC14Q8IZN3 488 aa15□□□□□ -0.01
DDX41-212ENST00000511040 TOP6BLQ8N6T0 577 aa15□□□□□ -0.01
DDX41-212ENST00000511040 ITFG1Q8TB96 612 aa15□□□□□ -0.01
DDX41-212ENST00000511040 TMC2Q8TDI7 906 aa15□□□□□ -0.01
DDX41-212ENST00000511040 ACSF2Q96CM8 615 aaPredicted RBP15□□□□□ -0.01
DDX41-212ENST00000511040 TSG101Q99816 390 aa15□□□□□ -0.01
DDX41-212ENST00000511040 CORO1BQ9BR76 489 aa15□□□□□ -0.01
DDX41-212ENST00000511040 MMRN2Q9H8L6 949 aa15□□□□□ -0.01
DDX41-212ENST00000511040 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15□□□□□ -0.011e-21■■■■■ 521.7
DDX41-212ENST00000511040 TMLHEQ9NVH6 421 aa15□□□□□ -0.01
DDX41-212ENST00000511040 DDX43Q9NXZ2 648 aaKnown RBP15□□□□□ -0.01
DDX41-212ENST00000511040 NXF1Q9UBU9 619 aaKnown RBP15□□□□□ -0.01
DDX41-212ENST00000511040 USTQ9Y2C2 406 aa15□□□□□ -0.01
DDX41-212ENST00000511040 YIPF1Q9Y548 306 aa15□□□□□ -0.01
DDX41-212ENST00000511040 CETN3O15182 167 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 VNN1O95497 513 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 RHOP08100 348 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 KRT13P13646 458 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 TSPY1Q01534 308 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 NCOA4Q13772 614 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 MORC3Q14149 939 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 WDR72Q3MJ13 1102 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 PABPC1LQ4VXU2 614 aaKnown RBP14.99□□□□□ -0.01
DDX41-212ENST00000511040 COBLL1Q53SF7 1204 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 RTL10Q7L3V2 364 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 HS6ST3Q8IZP7 471 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 TMEM86AQ8N2M4 240 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 KBTBD7Q8WVZ9 684 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 ING5Q8WYH8 240 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 SEPT5Q99719 369 aaPredicted RBP14.99□□□□□ -0.01
DDX41-212ENST00000511040 MRPL45Q9BRJ2 306 aaKnown RBP14.99□□□□□ -0.01
DDX41-212ENST00000511040 XYLT2Q9H1B5 865 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 SMOC2Q9H3U7 446 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 ABI2Q9NYB9 513 aaPredicted RBP14.99□□□□□ -0.01
DDX41-212ENST00000511040 CEP72Q9P209 647 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 MAFFQ9ULX9 164 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 NOTCH4Q99466 2003 aa14.99□□□□□ -0.01
DDX41-212ENST00000511040 BDP1A6H8Y1 2624 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 PPP1R3GB7ZBB8 358 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 NRG2O14511 850 aaPredicted RBP14.98□□□□□ -0.01
DDX41-212ENST00000511040 PSMA7O14818 248 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 MAPK13O15264 365 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 ATP2C2O75185 946 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 POU2F2P09086 479 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 PDGFRBP09619 1106 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 EPB41P11171 864 aaKnown RBP14.98□□□□□ -0.01
DDX41-212ENST00000511040 ALADP13716 330 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 LMO2P25791 158 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 GCLMP48507 274 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 AP3M2P53677 418 aa14.98□□□□□ -0.01
DDX41-212ENST00000511040 PSMC1P62191 440 aaKnown RBP14.98□□□□□ -0.01
DDX41-212ENST00000511040 TNNC1P63316 161 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms