RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 NTPCRQ9BSD7 190 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 NSRP1Q9H0G5 558 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 BRD9Q9H8M2 597 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 EHMT1Q9H9B1 1298 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 TRPV4Q9HBA0 871 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 GPR108Q9NPR9 543 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 PRDM11Q9NQV5 511 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 SPATS2LQ9NUQ6 558 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 GJD2Q9UKL4 321 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 PHTF1Q9UMS5 762 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 PTPN22Q9Y2R2 807 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 RRP7AQ9Y3A4 280 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 SNX8Q9Y5X2 465 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 HECW1Q76N89 1606 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 ZBED9Q6R2W3 1325 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 USP31Q70CQ4 1352 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 DNMBPQ6XZF7 1577 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 SETD5Q9C0A6 1442 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 GOLGA8AA7E2F4 631 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 FYB1O15117 783 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 RNF113AO15541 343 aaKnown RBP4.92□□□□□ -1.62
NIPBL-206ENST00000509429 STX6O43752 255 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 CEP104O60308 925 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TSPAN1O60635 241 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 KCNJ13O60928 360 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 RFPL1O75677 317 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 OLFM2O95897 454 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 KNG1P01042 644 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 MT-ND3P03897 115 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 EEF2P13639 858 aaKnown RBP4.92□□□□□ -1.62
NIPBL-206ENST00000509429 CD247P20963 164 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 CHKAP35790 457 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 MCM2P49736 904 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 ETV1P50549 477 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 MNAT1P51948 309 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 CBX1P83916 185 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 CD83Q01151 205 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 HHEXQ03014 270 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 PPIDQ08752 370 aaKnown RBP4.92□□□□□ -1.62
NIPBL-206ENST00000509429 BNIP1Q12981 228 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TCEA2Q15560 299 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 CCNG2Q16589 344 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 C15orf59Q2T9L4 293 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TUBB8Q3ZCM7 444 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 ANKDD1AQ495B1 522 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TM4SF20Q53R12 229 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 KRBOX4Q5JUW0 171 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 METTL11BQ5VVY1 283 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 DCAF15Q66K64 600 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 LIN54Q6MZP7 749 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 POMZP3Q6PJE2 187 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TMC5Q6UXY8 1006 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 MRGPREQ86SM8 312 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 SGMS1Q86VZ5 419 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 COLGALT2Q8IYK4 626 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 ZNF619Q8N2I2 560 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 IL17RDQ8NFM7 739 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 RASGRP4Q8TDF6 673 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 SSH3Q8TE77 659 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 POF1BQ8WVV4 589 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TCP11Q8WWU5 503 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 DNAAF4Q8WXU2 420 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 FATE1Q969F0 183 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 GCC1Q96CN9 775 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 SLC9A7Q96T83 725 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 RMDN3Q96TC7 470 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 BARD1Q99728 777 aaKnown RBP4.92□□□□□ -1.62
NIPBL-206ENST00000509429 ADPGKQ9BRR6 497 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 LSM14BQ9BX40 385 aaKnown RBP4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TEX13BQ9BXU2 312 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TSGA10Q9BZW7 698 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 LMAN2LQ9H0V9 348 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 DNAJC18Q9H819 358 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 AASDHPPTQ9NRN7 309 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TOPORSQ9NS56 1045 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-206ENST00000509429 TOMM22Q9NS69 142 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 KLHL11Q9NVR0 708 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 PPP1R14DQ9NXH3 145 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 RRN3Q9NYV6 651 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 ADAMTS1Q9UHI8 967 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 SH3BGRL2Q9UJC5 107 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 ZNF180Q9UJW8 692 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 STRIP2Q9ULQ0 834 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 DMTF1Q9Y222 760 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 MSRB2Q9Y3D2 182 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 CD2APQ9Y5K6 639 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 SLC4A4Q9Y6R1 1079 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 WDR97A6NE52 1622 aa4.92□□□□□ -1.62
NIPBL-206ENST00000509429 RAB3GAP2Q9H2M9 1393 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 A0A1B0GUL7 405 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 C17orf113A0A1B0GUU1 675 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 F5H423 210 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 NDC80O14777 642 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 TLR3O15455 904 aaKnown RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 SLC7A4O43246 635 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 DKC1O60832 514 aaKnown RBP eCLIP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 RTN2O75298 545 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 RPS6KA4O75676 772 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 PALMO75781 387 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 USP1O94782 785 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms