RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 GIPC2Q8TF65 315 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 E2F7Q96AV8 911 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 MSANTD3Q96H12 275 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 SLC46A2Q9BY10 475 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 GPR88Q9GZN0 384 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 DUSP15Q9H1R2 295 aaPredicted RBP11.11□□□□□ -0.63
COPS4-207ENST00000509317 EBF3Q9H4W6 596 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 KMT5AQ9NQR1 393 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 GKN1Q9NS71 199 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 ARHGAP28Q9P2N2 729 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 SLC8A2Q9UPR5 921 aa11.11□□□□□ -0.63
COPS4-207ENST00000509317 PDCD11Q14690 1871 aaKnown RBP11.1□□□□□ -0.63
COPS4-207ENST00000509317 PATE3B3GLJ2 98 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 M0QZQ0 153 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 FOXD2O60548 495 aaPredicted RBP11.1□□□□□ -0.63
COPS4-207ENST00000509317 ATF6P18850 670 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 CDC25AP30304 524 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 TNFSF9P41273 254 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 GPR17Q13304 367 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 DMP1Q13316 513 aaPredicted RBP11.1□□□□□ -0.63
COPS4-207ENST00000509317 PLD1Q13393 1074 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 TMEM196Q5HYL7 178 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 SH3PXD2AQ5TCZ1 1133 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 KIAA1211LQ6NV74 962 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 DSTYKQ6XUX3 929 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 HAUS6Q7Z4H7 955 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 USP37Q86T82 979 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 TTC16Q8NEE8 873 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 EZH1Q92800 747 aaPredicted RBP11.1□□□□□ -0.63
COPS4-207ENST00000509317 GTF3C6Q969F1 213 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 PSMG2Q969U7 264 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 LOXL4Q96JB6 756 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 SEPT5Q99719 369 aaPredicted RBP11.1□□□□□ -0.63
COPS4-207ENST00000509317 TMEM121BQ9BXQ6 578 aaPredicted RBP11.1□□□□□ -0.63
COPS4-207ENST00000509317 IL21Q9HBE4 155 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 WASF3Q9UPY6 502 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 FREM2Q5SZK8 3169 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 LAMA5O15230 3695 aa11.1□□□□□ -0.63
COPS4-207ENST00000509317 GREB1Q4ZG55 1949 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 LNP1A1A4G5 178 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 CAVIN2O95810 425 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 MCM2P49736 904 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 NOLC1Q14978 699 aaKnown RBP eCLIP11.09□□□□□ -0.63
COPS4-207ENST00000509317 ARHGAP15Q53QZ3 475 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 OVOS1Q6IE37 1185 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 C1orf228Q6PIY5 440 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 SYNPOQ8N3V7 929 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 SNX29Q8TEQ0 813 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 FAM83CQ9BQN1 747 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 TASP1Q9H6P5 420 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 TMEM134Q9H6X4 195 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 VPS45Q9NRW7 570 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 MAFFQ9ULX9 164 aa11.09□□□□□ -0.63
COPS4-207ENST00000509317 ITPR1Q14643 2758 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 NPHP3-ACAD11A0A0J9YXS1 232 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 OR6C75A6NL08 312 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 LACTBL1A8MY62 500 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.64
COPS4-207ENST00000509317 AARSP49588 968 aaKnown RBP eCLIP11.08□□□□□ -0.64
COPS4-207ENST00000509317 GPR15P49685 360 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 GALK1P51570 392 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 GRSF1Q12849 480 aaKnown RBP eCLIP11.08□□□□□ -0.64
COPS4-207ENST00000509317 RUNX3Q13761 415 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 TRIM29Q14134 588 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 MGAT5BQ3V5L5 792 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 SLC39A12Q504Y0 691 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 RINT1Q6NUQ1 792 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 TMEM150AQ86TG1 271 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 C4orf32Q8N8J7 132 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 MAB21L3Q8N8X9 362 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 RPLP0P6Q8NHW5 317 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 USP13Q92995 863 aaPredicted RBP11.08□□□□□ -0.64
COPS4-207ENST00000509317 ZC3H10Q96K80 434 aaKnown RBP11.08□□□□□ -0.64
COPS4-207ENST00000509317 SCNM1Q9BWG6 230 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 TPSD1Q9BZJ3 242 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 LRWD1Q9UFC0 647 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 PCDHGA5Q9Y5G8 931 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 ATG2BQ96BY7 2078 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 LOC400499M0QZD8 3231 aa11.08□□□□□ -0.64
COPS4-207ENST00000509317 KIF26AQ9ULI4 1882 aaPredicted RBP11.08□□□□□ -0.64
COPS4-207ENST00000509317 TTC26A0AVF1 554 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 BCLAF3A2AJT9 711 aaKnown RBP11.07□□□□□ -0.64
COPS4-207ENST00000509317 SRRM3A6NNA2 597 aaPredicted RBP11.07□□□□□ -0.64
COPS4-207ENST00000509317 TRDMT1O14717 391 aaKnown RBP11.07□□□□□ -0.64
COPS4-207ENST00000509317 TOM1L1O75674 476 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 BCKDHBP21953 392 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 LRPAP1P30533 357 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 GBP1P32455 592 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 PLCB2Q00722 1185 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 ZRSR1Q15695 479 aaKnown RBP11.07□□□□□ -0.64
COPS4-207ENST00000509317 ZBTB6Q15916 424 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 ENOX2Q16206 610 aaKnown RBP11.07□□□□□ -0.64
COPS4-207ENST00000509317 IL17AQ16552 155 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 UAP1L1Q3KQV9 507 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 TTC38Q5R3I4 469 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 SDHAF4Q5VUM1 108 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 HAUS3Q68CZ6 603 aa11.07□□□□□ -0.64
COPS4-207ENST00000509317 TXNDC8Q6A555 127 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms