RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 MRPS9P82933 396 aaKnown RBP3.05□□□□□ -1.92
XRCC4-204ENST00000509268 TUBB3Q13509 450 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 RBMS2Q15434 407 aaKnown RBP3.05□□□□□ -1.92
XRCC4-204ENST00000509268 ANO4Q32M45 955 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 WDR53Q7Z5U6 358 aaPredicted RBP3.05□□□□□ -1.92
XRCC4-204ENST00000509268 PNLDC1Q8NA58 520 aaKnown RBP3.05□□□□□ -1.92
XRCC4-204ENST00000509268 ATRIPQ8WXE1 791 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 ZC3H10Q96K80 434 aaKnown RBP3.05□□□□□ -1.92
XRCC4-204ENST00000509268 OSBPL9Q96SU4 736 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 FAM118BQ9BPY3 351 aa3.05□□□□□ -1.92
XRCC4-204ENST00000509268 TRIAP1O43715 76 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 AGFG2O95081 481 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 RHOP08100 348 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 PRF1P14222 555 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 ENPP1P22413 925 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 PCSK6P29122 969 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 HOXA4Q00056 320 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 PPP3CAQ08209 521 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 PABPC4Q13310 644 aaKnown RBP eCLIP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 GTF2H3Q13889 308 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 TEDDM1Q5T9Z0 273 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 FBXL22Q6P050 247 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 FAM9AQ8IZU1 332 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 AUTS2Q8WXX7 1259 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 SLC5A5Q92911 643 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 SLCO5A1Q9H2Y9 848 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 MTHFD2P13995 350 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 CDK11BP21127 795 aaKnown RBP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 ATP5F1P24539 256 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 IL1R2P27930 398 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 RBL2Q08999 1139 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 PDCD1Q15116 288 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 TBCCQ15814 346 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 CFAP52Q8N1V2 620 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 TSPEARQ8WU66 669 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 TMEM255BQ8WV15 326 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 TPSD1Q9BZJ3 242 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 AMBRA1Q9C0C7 1298 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 C11orf54Q9H0W9 315 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 MANSC1Q9H8J5 431 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 POT1Q9NUX5 634 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 DKK3Q9UBP4 350 aa3.04□□□□□ -1.92
XRCC4-204ENST00000509268 CDK11AQ9UQ88 783 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 RUVBL1Q9Y265 456 aaKnown RBP3.04□□□□□ -1.92
XRCC4-204ENST00000509268 F5H697 171 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 QSOX1O00391 747 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 FKBP9O95302 570 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 CRYABP02511 175 aaKnown RBP3.03□□□□□ -1.92
XRCC4-204ENST00000509268 HMGB1P09429 215 aaKnown RBP3.03□□□□□ -1.92
XRCC4-204ENST00000509268 MTHFD1P11586 935 aaKnown RBP3.03□□□□□ -1.92
XRCC4-204ENST00000509268 DDCP20711 480 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 SLC6A9P48067 706 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 TTC3P53804 2025 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 ATP8B2P98198 1209 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 MC2RQ01718 297 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 TRIM71Q2Q1W2 868 aaKnown RBP3.03□□□□□ -1.92
XRCC4-204ENST00000509268 C10orf25Q5T742 122 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 UTP14CQ5TAP6 766 aaKnown RBP3.03□□□□□ -1.92
XRCC4-204ENST00000509268 FKBP9P1Q75LS8 142 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 CUL5Q93034 780 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 RNPC3Q96LT9 517 aaKnown RBP3.03□□□□□ -1.92
XRCC4-204ENST00000509268 FEZ1Q99689 392 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 ADI1Q9BV57 179 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 FOXP1Q9H334 677 aaPredicted RBP3.03□□□□□ -1.92
XRCC4-204ENST00000509268 IFT122Q9HBG6 1241 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 ZBTB21Q9ULJ3 1066 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 EDARQ9UNE0 448 aa3.03□□□□□ -1.92
XRCC4-204ENST00000509268 C4orf47A7E2U8 309 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 H0YIZ8 118 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 FCHO1O14526 889 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 AMY1AP04745 511 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 EEFSECP57772 596 aaKnown RBP3.02□□□□□ -1.93
XRCC4-204ENST00000509268 IL2P60568 153 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 MGAT2Q10469 447 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 MUM1Q2TAK8 710 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 C9orf50Q5SZB4 431 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 SOGA3Q5TF21 947 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 OR2W6PQ8NHA6 318 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 POC1BQ8TC44 478 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 LRIG1Q96JA1 1093 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 ACE2Q9BYF1 805 aaPredicted RBP3.02□□□□□ -1.93
XRCC4-204ENST00000509268 EMC7Q9NPA0 242 aa3.02□□□□□ -1.93
XRCC4-204ENST00000509268 FAM171A2A8MVW0 826 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 NEMP1O14524 444 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 PPP1R12AO14974 1030 aaPredicted RBP3.01□□□□□ -1.93
XRCC4-204ENST00000509268 SOAT2O75908 522 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 SLC6A4P31645 630 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 ADCYAP1R1P41586 468 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 CDKN2AP42771 156 aaKnown RBP3.01□□□□□ -1.93
XRCC4-204ENST00000509268 HILS1P60008 231 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 CTXN1P60606 82 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 SRSF1Q07955 248 aaKnown RBP eCLIP3.01□□□□□ -1.93
XRCC4-204ENST00000509268 CERKLQ49MI3 558 aaPredicted RBP3.01□□□□□ -1.93
XRCC4-204ENST00000509268 PCID2Q5JVF3 399 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 ZNF618Q5T7W0 954 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 GFI1BQ5VTD9 330 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 FAM177A1Q8N128 213 aaPredicted RBP3.01□□□□□ -1.93
XRCC4-204ENST00000509268 AHI1Q8N157 1196 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms