RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 PYM1Q9BRP8 204 aaKnown RBP13.51□□□□□ -0.25
PDPN-208ENST00000509009 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 ZNF334Q9HCZ1 680 aaPredicted RBP13.51□□□□□ -0.25
PDPN-208ENST00000509009 TRPV5Q9NQA5 729 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 DSEQ9UL01 958 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 FRYLO94915 3013 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 A0A1W2PRU2 124 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 NCAM2O15394 837 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 LDHAP00338 332 aaKnown RBP13.5□□□□□ -0.25
PDPN-208ENST00000509009 GARTP22102 1010 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 TARSP26639 723 aaKnown RBP13.5□□□□□ -0.25
PDPN-208ENST00000509009 GDI1P31150 447 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 TUFMP49411 452 aaKnown RBP13.5□□□□□ -0.25
PDPN-208ENST00000509009 CDR1P51861 262 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 ALCAMQ13740 583 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 STK38Q15208 465 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 SLC39A12Q504Y0 691 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 SCARA3Q6AZY7 606 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 GAREM2Q75VX8 874 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 SYCP3Q8IZU3 236 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 ZNF687Q8N1G0 1237 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 THEM5Q8N1Q8 247 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 IRF7Q92985 503 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 PSMG2Q969U7 264 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 RSPRY1Q96DX4 576 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 SPATA6Q9NWH7 488 aaPredicted RBP13.5□□□□□ -0.25
PDPN-208ENST00000509009 MRPS17Q9Y2R5 130 aaKnown RBP13.5□□□□□ -0.25
PDPN-208ENST00000509009 COL4A3Q01955 1670 aa13.5□□□□□ -0.25
PDPN-208ENST00000509009 SCN1AP35498 2009 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 GOLGA8IPA6NC78 632 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 GOLGA8JA6NMD2 632 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 HEPACAM2A8MVW5 462 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 MAN2B1O00754 1011 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 SPTLC2O15270 562 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 PRPF6O94906 941 aaKnown RBP13.49□□□□□ -0.25
PDPN-208ENST00000509009 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
PDPN-208ENST00000509009 MAGEA9P43362 315 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 RPS9P46781 194 aaKnown RBP13.49□□□□□ -0.25
PDPN-208ENST00000509009 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
PDPN-208ENST00000509009 STXBP5Q5T5C0 1151 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 ITIH5Q86UX2 942 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 ARID3BQ8IVW6 561 aaPredicted RBP13.49□□□□□ -0.25
PDPN-208ENST00000509009 BRSK2Q8IWQ3 736 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 CCDC65Q8IXS2 484 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 KCNG4Q8TDN1 519 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 CACTINQ8WUQ7 758 aaKnown RBP13.49□□□□□ -0.25
PDPN-208ENST00000509009 DEPDC1BQ8WUY9 529 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 SNX21Q969T3 373 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 LRRC3BQ96PB8 259 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 CBWD1Q9BRT8 395 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 MKNK1Q9BUB5 465 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 ATXN3LQ9H3M9 355 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 PCIF1Q9H4Z3 704 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 SLITRK6Q9H5Y7 841 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 FBXO4Q9UKT5 387 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 AGAP1Q9UPQ3 857 aa13.49□□□□□ -0.25
PDPN-208ENST00000509009 NCANO14594 1321 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
PDPN-208ENST00000509009 ZNF263O14978 683 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 LAMTOR5O43504 91 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 EXTL3O43909 919 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 PPP6R2O75170 966 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 FGF19O95750 216 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 HAPLN1P10915 354 aaPredicted RBP13.48□□□□□ -0.25
PDPN-208ENST00000509009 GABRR2P28476 465 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 PNPLA4P41247 253 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 SMARCB1Q12824 385 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 E2F4Q16254 413 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 ZNF528Q3MIS6 628 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 SV2CQ496J9 727 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 CSGALNACT2Q8N6G5 542 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 C1orf127Q8N9H9 656 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 C2orf15Q8WU43 125 aaKnown RBP13.48□□□□□ -0.25
PDPN-208ENST00000509009 HPS3Q969F9 1004 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 FAM84AQ96KN4 292 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 ZNF396Q96N95 335 aaPredicted RBP13.48□□□□□ -0.25
PDPN-208ENST00000509009 LPIN3Q9BQK8 851 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 TMEM206Q9H813 350 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 IL21Q9HBE4 155 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 PDE11AQ9HCR9 933 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 KBTBD4Q9NVX7 518 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 OTOGLQ3ZCN5 2332 aa13.48□□□□□ -0.25
PDPN-208ENST00000509009 ARNTLO00327 626 aa13.47□□□□□ -0.25
PDPN-208ENST00000509009 CHADO15335 359 aa13.47□□□□□ -0.25
PDPN-208ENST00000509009 ITGB3P05106 788 aa13.47□□□□□ -0.25
PDPN-208ENST00000509009 ATF6P18850 670 aa13.47□□□□□ -0.25
PDPN-208ENST00000509009 POLR2BP30876 1174 aaKnown RBP13.47□□□□□ -0.25
PDPN-208ENST00000509009 HOXD13P35453 343 aa13.47□□□□□ -0.25
PDPN-208ENST00000509009 MLLT6P55198 1093 aaPredicted RBP13.47□□□□□ -0.25
PDPN-208ENST00000509009 CSTF1Q05048 431 aaKnown RBP13.47□□□□□ -0.25
PDPN-208ENST00000509009 FCHO2Q0JRZ9 810 aa13.47□□□□□ -0.25
PDPN-208ENST00000509009 MGAT5BQ3V5L5 792 aa13.47□□□□□ -0.25
PDPN-208ENST00000509009 GPR158Q5T848 1215 aa13.47□□□□□ -0.25
PDPN-208ENST00000509009 ZC3H14Q6PJT7 736 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 275.8 ms