RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 C2CD2LO14523 706 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 GABRDO14764 452 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 TRAPPC3O43617 180 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 TACC1O75410 805 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 CYP11A1P05108 521 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 PDGFRBP09619 1106 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 ACAT1P24752 427 aaKnown RBP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 PPM1AP35813 382 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 NDST1P52848 882 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 ERVK-21P61565 698 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 PLCB3Q01970 1234 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 RAB30Q15771 203 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 KIAA0319Q5VV43 1072 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 TMEM270Q6UE05 265 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 PRSS55Q6UWB4 352 aaPredicted RBP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 CACNA2D4Q7Z3S7 1137 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 VPS52Q8N1B4 723 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 STK33Q9BYT3 514 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 CHST7Q9NS84 486 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 CAPN11Q9UMQ6 739 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 LRRC53A6NM62 1247 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 C5orf67F2Z3F1 127 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 ATP2C2O75185 946 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 CILPO75339 1184 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 USP8P40818 1118 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 SMAD3P84022 425 aaKnown RBP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 INCA1Q0VD86 236 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 CAMK1Q14012 370 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 ARID5BQ14865 1188 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 VARS2Q5ST30 1063 aaKnown RBP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 RSPO2Q6UXX9 243 aaPredicted RBP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 DPH6Q7L8W6 267 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 DDX53Q86TM3 631 aaKnown RBP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 OR6B3Q8NGW1 331 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 OR10T2Q8NGX3 314 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 ARNTL2Q8WYA1 636 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 TIFAQ96CG3 184 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 FAXDC2Q96IV6 333 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 TMEM209Q96SK2 561 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 TTPALQ9BTX7 342 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 NUP58Q9BVL2 599 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 ELOVL4Q9GZR5 314 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 SLC28A3Q9HAS3 691 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 CYP3A43Q9HB55 503 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 PCDHB4Q9Y5E5 795 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 PCDHGC5Q9Y5F6 944 aa18.66■□□□□ 0.58
TRIM60-203ENST00000508504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 SPTBN5Q9NRC6 3674 aaKnown RBP18.66■□□□□ 0.58
TRIM60-203ENST00000508504 GRM6O15303 877 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 SOD2P04179 222 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 KRT5P13647 590 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 RFX1P22670 979 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 WARSP23381 471 aaKnown RBP18.65■□□□□ 0.58
TRIM60-203ENST00000508504 GNL1P36915 607 aaPredicted RBP18.65■□□□□ 0.58
TRIM60-203ENST00000508504 ARID5AQ03989 594 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 YWHAHQ04917 246 aaPredicted RBP18.65■□□□□ 0.58
TRIM60-203ENST00000508504 OVOS1Q6IE37 1185 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
TRIM60-203ENST00000508504 ENOSF1Q7L5Y1 443 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 SPPL3Q8TCT6 385 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 SPAG5Q96R06 1193 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 PLVAPQ9BX97 442 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 DDX43Q9NXZ2 648 aaKnown RBP18.65■□□□□ 0.58
TRIM60-203ENST00000508504 BARX2Q9UMQ3 279 aaPredicted RBP18.65■□□□□ 0.58
TRIM60-203ENST00000508504 STXBP5LQ9Y2K9 1186 aa18.65■□□□□ 0.58
TRIM60-203ENST00000508504 A0A1W2PQJ5 194 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 A8MXQ7 604 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 SYN3O14994 580 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 CYP26A1O43174 497 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 GFPT2O94808 682 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 RPL17P18621 184 aaKnown RBP18.64■□□□□ 0.57
TRIM60-203ENST00000508504 TYMPP19971 482 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 CLCN1P35523 988 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 KRT9P35527 623 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 RAD23BP54727 409 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 ERVFC1P60507 584 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 PSMC1P62191 440 aaKnown RBP18.64■□□□□ 0.57
TRIM60-203ENST00000508504 KRT17Q04695 432 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 ELAVL2Q12926 359 aaKnown RBP18.64■□□□□ 0.57
TRIM60-203ENST00000508504 MRPL58Q14197 206 aaKnown RBP18.64■□□□□ 0.57
TRIM60-203ENST00000508504 USP41Q3LFD5 358 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 LRIT3Q3SXY7 679 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 PRPF38BQ5VTL8 546 aaKnown RBP18.64■□□□□ 0.57
TRIM60-203ENST00000508504 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.64■□□□□ 0.57
TRIM60-203ENST00000508504 PPFIBP1Q86W92 1011 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 FAM71AQ8IYT1 594 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 C12orf29Q8N999 325 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 LNX1Q8TBB1 728 aaPredicted RBP18.64■□□□□ 0.57
TRIM60-203ENST00000508504 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 LUC7L2Q9Y383 392 aaKnown RBP18.64■□□□□ 0.57
TRIM60-203ENST00000508504 RWDD3Q9Y3V2 267 aa18.64■□□□□ 0.57
TRIM60-203ENST00000508504 RFXAPO00287 272 aa18.63■□□□□ 0.57
TRIM60-203ENST00000508504 SOX1O00570 391 aaPredicted RBP18.63■□□□□ 0.57
TRIM60-203ENST00000508504 MFAP3LO75121 409 aa18.63■□□□□ 0.57
TRIM60-203ENST00000508504 OAZ2O95190 189 aa18.63■□□□□ 0.57
TRIM60-203ENST00000508504 OR4Q2P0C623 313 aa18.63■□□□□ 0.57
TRIM60-203ENST00000508504 PAX3P23760 479 aa18.63■□□□□ 0.57
TRIM60-203ENST00000508504 ZNF132P52740 706 aa18.63■□□□□ 0.57
TRIM60-203ENST00000508504 PDXDC1Q6P996 788 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms