RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 BFSP1Q12934 665 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 CYP4A22Q5TCH4 519 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 WSCD1Q658N2 575 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 CENPPQ6IPU0 288 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 TRAPPC11Q7Z392 1133 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 TMEM130Q8N3G9 435 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 RDH13Q8NBN7 331 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 ENGASEQ8NFI3 743 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 SPPL2BQ8TCT7 592 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 HPDLQ96IR7 371 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 MYADMQ96S97 322 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 GDE1Q9NZC3 331 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 DNMT3BQ9UBC3 853 aaKnown RBP21.38■■□□□ 1.01
SFXN1-209ENST00000508290 SIX4Q9UIU6 781 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 FRMD4BQ9Y2L6 1034 aa21.38■■□□□ 1.01
SFXN1-209ENST00000508290 MRPS23Q9Y3D9 190 aaKnown RBP21.38■■□□□ 1.01
SFXN1-209ENST00000508290 MTMR11A4FU01 709 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 TMEM221A6NGB7 291 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 M0R296 226 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 STAU1O95793 577 aaKnown RBP21.37■■□□□ 1.01
SFXN1-209ENST00000508290 NR3C1P04150 777 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 RHOP08100 348 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 PCSK1P29120 753 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 ATICP31939 592 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 EPHB3P54753 998 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 CLDN10P78369 228 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 ENPEPQ07075 957 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 SNW1Q13573 536 aaKnown RBP21.37■■□□□ 1.01
SFXN1-209ENST00000508290 NFE2Q16621 373 aaPredicted RBP21.37■■□□□ 1.01
SFXN1-209ENST00000508290 PDZD4Q76G19 769 aaPredicted RBP21.37■■□□□ 1.01
SFXN1-209ENST00000508290 OR5B17Q8NGF7 314 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 OR10T2Q8NGX3 314 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 FGF13Q92913 245 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 CCDC127Q96BQ5 260 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 ACBD6Q9BR61 282 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 HCN4Q9Y3Q4 1203 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 ARIH1Q9Y4X5 557 aaPredicted RBP21.37■■□□□ 1.01
SFXN1-209ENST00000508290 YIPF1Q9Y548 306 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 SNX9Q9Y5X1 595 aa21.37■■□□□ 1.01
SFXN1-209ENST00000508290 PTPRJQ12913 1337 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 TCHHQ07283 1943 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 FAM86C2PA6NEL3 165 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 ANHXE9PGG2 379 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 FGF19O95750 216 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 ASGR2P07307 311 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 EPHA5P54756 1037 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 TWF1Q12792 350 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 ITIH5Q86UX2 942 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 PDCL2Q8N4E4 241 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 ASAH2Q9NR71 780 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 CHMP5Q9NZZ3 219 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 L1RE1Q9UN81 338 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 DUSP12Q9UNI6 340 aa21.36■■□□□ 1.01
SFXN1-209ENST00000508290 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
SFXN1-209ENST00000508290 OR4Q2P0C623 313 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 DUSP4Q13115 394 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 COBLL1Q53SF7 1204 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 LMBRD2Q68DH5 695 aaPredicted RBP21.35■■□□□ 1.01
SFXN1-209ENST00000508290 ADGRF2Q8IZF7 708 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 TMC2Q8TDI7 906 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 PARD3BQ8TEW8 1205 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 SYAP1Q96A49 352 aaPredicted RBP21.35■■□□□ 1.01
SFXN1-209ENST00000508290 PGLYRP2Q96PD5 576 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 CORO1BQ9BR76 489 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 GPR88Q9GZN0 384 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 ABCB6Q9NP58 842 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 HCFC1R1Q9NWW0 138 aa21.35■■□□□ 1.01
SFXN1-209ENST00000508290 TSC2P49815 1807 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 GABRDO14764 452 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 IKBKBO14920 756 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 PPP1R2P41236 205 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 NTHL1P78549 312 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 TRPC3Q13507 836 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 HTR4Q13639 388 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 VEPH1Q14D04 833 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 EDRF1Q3B7T1 1238 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 SLC39A12Q504Y0 691 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 LIMS2Q7Z4I7 341 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 SUGP1Q8IWZ8 645 aaKnown RBP21.34■■□□□ 1.01
SFXN1-209ENST00000508290 NPAS3Q8IXF0 933 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 SPATA20Q8TB22 786 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 ASIC4Q96FT7 647 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 RTP3Q9BQQ7 232 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 KCNH6Q9H252 994 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 DDX43Q9NXZ2 648 aaKnown RBP21.34■■□□□ 1.01
SFXN1-209ENST00000508290 PCDHB5Q9Y5E4 795 aa21.34■■□□□ 1.01
SFXN1-209ENST00000508290 PHACTR2O75167 634 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 VNN2O95498 520 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 NR2F2P24468 414 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 MAPRE1Q15691 268 aaKnown RBP21.33■■□□□ 1.01
SFXN1-209ENST00000508290 PRSS36Q5K4E3 855 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 ZNF658Q5TYW1 1059 aaPredicted RBP21.33■■□□□ 1.01
SFXN1-209ENST00000508290 INTS8Q75QN2 995 aaKnown RBP21.33■■□□□ 1.01
SFXN1-209ENST00000508290 ATAD1Q8NBU5 361 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 ITFG1Q8TB96 612 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 SMARCE1Q969G3 411 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 PBXIP1Q96AQ6 731 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 VRTNQ9H8Y1 702 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 CEP72Q9P209 647 aa21.33■■□□□ 1.01
SFXN1-209ENST00000508290 TACC1O75410 805 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms